Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATXN3LQ9H3M9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATXN3LQ9H3M9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.18■■□□□ 1.46
ATXN3LQ9H3M9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 AC005837.3-201ENST00000612163 286 ntBASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATXN3LQ9H3M9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
ATXN3LQ9H3M9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ATXN3LQ9H3M9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATXN3LQ9H3M9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATXN3LQ9H3M9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.14■■□□□ 1.45
ATXN3LQ9H3M9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.14■■□□□ 1.45
ATXN3LQ9H3M9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
ATXN3LQ9H3M9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ATXN3LQ9H3M9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 AC005703.6-201ENST00000623265 1329 ntBASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 SRD5A1P1-201ENST00000442297 786 ntBASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.13■■□□□ 1.45
ATXN3LQ9H3M9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ATXN3LQ9H3M9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATXN3LQ9H3M9 PBX2P1-201ENST00000493219 1291 ntBASIC24.12■■□□□ 1.45
ATXN3LQ9H3M9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.12■■□□□ 1.45
ATXN3LQ9H3M9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 AC131274.2-201ENST00000580697 1507 ntBASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 AC133561.4-201ENST00000566112 224 ntBASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATXN3LQ9H3M9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATXN3LQ9H3M9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
ATXN3LQ9H3M9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ATXN3LQ9H3M9 UNC93B3-201ENST00000308076 687 ntBASIC24.09■■□□□ 1.45
ATXN3LQ9H3M9 MIR6089-201ENST00000616698 64 ntBASIC24.09■■□□□ 1.45
ATXN3LQ9H3M9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATXN3LQ9H3M9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ATXN3LQ9H3M9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 AC106739.1-201ENST00000617035 715 ntBASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ATXN3LQ9H3M9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ATXN3LQ9H3M9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.07■■□□□ 1.44
ATXN3LQ9H3M9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.06■■□□□ 1.44
ATXN3LQ9H3M9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms