Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDH23Q9H251 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CDH23Q9H251 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CDH23Q9H251 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.82■■□□□ 1.56
CDH23Q9H251 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDH23Q9H251 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.82■■□□□ 1.56
CDH23Q9H251 C17orf82-201ENST00000623772 1530 ntBASIC24.82■■□□□ 1.56
CDH23Q9H251 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDH23Q9H251 AC090877.2-201ENST00000558441 1738 ntBASIC24.81■■□□□ 1.56
CDH23Q9H251 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.81■■□□□ 1.56
CDH23Q9H251 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.81■■□□□ 1.56
CDH23Q9H251 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
CDH23Q9H251 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.81■■□□□ 1.56
CDH23Q9H251 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.81■■□□□ 1.56
CDH23Q9H251 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.81■■□□□ 1.56
CDH23Q9H251 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDH23Q9H251 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CDH23Q9H251 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.8■■□□□ 1.56
CDH23Q9H251 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDH23Q9H251 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CDH23Q9H251 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
CDH23Q9H251 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.8■■□□□ 1.56
CDH23Q9H251 AC099791.2-201ENST00000605725 427 ntBASIC24.8■■□□□ 1.56
CDH23Q9H251 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CDH23Q9H251 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CDH23Q9H251 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.79■■□□□ 1.56
CDH23Q9H251 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CDH23Q9H251 AC123595.1-201ENST00000440769 1046 ntBASIC24.79■■□□□ 1.56
CDH23Q9H251 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDH23Q9H251 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CDH23Q9H251 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CDH23Q9H251 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.78■■□□□ 1.56
CDH23Q9H251 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDH23Q9H251 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDH23Q9H251 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.78■■□□□ 1.56
CDH23Q9H251 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDH23Q9H251 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDH23Q9H251 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.77■■□□□ 1.56
CDH23Q9H251 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.77■■□□□ 1.56
CDH23Q9H251 TERF1P2-201ENST00000583350 1212 ntBASIC24.77■■□□□ 1.56
CDH23Q9H251 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDH23Q9H251 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.77■■□□□ 1.56
CDH23Q9H251 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDH23Q9H251 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDH23Q9H251 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.77■■□□□ 1.56
CDH23Q9H251 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CDH23Q9H251 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.76■■□□□ 1.55
CDH23Q9H251 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDH23Q9H251 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDH23Q9H251 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDH23Q9H251 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDH23Q9H251 AC104771.1-201ENST00000603335 964 ntBASIC24.76■■□□□ 1.55
CDH23Q9H251 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 CDCA4P2-201ENST00000441182 718 ntBASIC24.75■■□□□ 1.55
CDH23Q9H251 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.75■■□□□ 1.55
CDH23Q9H251 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 AC096887.2-201ENST00000623443 1957 ntBASIC24.75■■□□□ 1.55
CDH23Q9H251 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
CDH23Q9H251 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDH23Q9H251 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDH23Q9H251 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.74■■□□□ 1.55
CDH23Q9H251 AC009102.2-201ENST00000606772 1639 ntBASIC24.74■■□□□ 1.55
CDH23Q9H251 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDH23Q9H251 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDH23Q9H251 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.74■■□□□ 1.55
CDH23Q9H251 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.74■■□□□ 1.55
CDH23Q9H251 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.73■■□□□ 1.55
CDH23Q9H251 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDH23Q9H251 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDH23Q9H251 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.73■■□□□ 1.55
CDH23Q9H251 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.73■■□□□ 1.55
CDH23Q9H251 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.73■■□□□ 1.55
CDH23Q9H251 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.73■■□□□ 1.55
CDH23Q9H251 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CDH23Q9H251 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDH23Q9H251 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.73■■□□□ 1.55
CDH23Q9H251 TSPY26P-201ENST00000476365 1326 ntBASIC24.72■■□□□ 1.55
CDH23Q9H251 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDH23Q9H251 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDH23Q9H251 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.72■■□□□ 1.55
CDH23Q9H251 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CDH23Q9H251 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.72■■□□□ 1.55
CDH23Q9H251 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.72■■□□□ 1.55
CDH23Q9H251 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDH23Q9H251 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
CDH23Q9H251 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDH23Q9H251 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CDH23Q9H251 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDH23Q9H251 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CDH23Q9H251 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms