Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 AL117328.2-201ENST00000624617 1940 ntBASIC23.94■■□□□ 1.42
DDX47Q9H0S4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX47Q9H0S4 ANOS2P-203ENST00000472227 1816 ntBASIC23.94■■□□□ 1.42
DDX47Q9H0S4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX47Q9H0S4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX47Q9H0S4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
DDX47Q9H0S4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX47Q9H0S4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX47Q9H0S4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX47Q9H0S4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 AC233723.2-201ENST00000623798 2106 ntBASIC23.9■■□□□ 1.42
DDX47Q9H0S4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX47Q9H0S4 CLDN5-201ENST00000403084 2357 ntBASIC23.89■■□□□ 1.42
DDX47Q9H0S4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
DDX47Q9H0S4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
DDX47Q9H0S4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX47Q9H0S4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX47Q9H0S4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX47Q9H0S4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX47Q9H0S4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.89■■□□□ 1.41
DDX47Q9H0S4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX47Q9H0S4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX47Q9H0S4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
DDX47Q9H0S4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DDX47Q9H0S4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
DDX47Q9H0S4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.88■■□□□ 1.41
DDX47Q9H0S4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
DDX47Q9H0S4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.88■■□□□ 1.41
DDX47Q9H0S4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
DDX47Q9H0S4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 EP400NL-214ENST00000641289 2402 ntBASIC23.86■■□□□ 1.41
DDX47Q9H0S4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.86■■□□□ 1.41
DDX47Q9H0S4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX47Q9H0S4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 DUSP8P3-201ENST00000399571 1760 ntBASIC23.84■■□□□ 1.41
DDX47Q9H0S4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.84■■□□□ 1.41
DDX47Q9H0S4 AC009831.1-201ENST00000580420 1582 ntBASIC23.83■■□□□ 1.41
DDX47Q9H0S4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms