Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC004911.1-201ENST00000416316 871 ntBASIC19.45■□□□□ 0.7
FOXC2Q99958 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXC2Q99958 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXC2Q99958 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXC2Q99958 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXC2Q99958 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXC2Q99958 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXC2Q99958 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXC2Q99958 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXC2Q99958 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXC2Q99958 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXC2Q99958 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXC2Q99958 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
FOXC2Q99958 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXC2Q99958 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXC2Q99958 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXC2Q99958 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXC2Q99958 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FOXC2Q99958 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXC2Q99958 AC241377.3-202ENST00000626088 1088 ntBASIC19.44■□□□□ 0.7
FOXC2Q99958 AC241585.3-202ENST00000628937 1088 ntBASIC19.44■□□□□ 0.7
FOXC2Q99958 AC245100.8-202ENST00000629247 1058 ntBASIC19.44■□□□□ 0.7
FOXC2Q99958 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXC2Q99958 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXC2Q99958 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXC2Q99958 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXC2Q99958 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXC2Q99958 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXC2Q99958 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXC2Q99958 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
FOXC2Q99958 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
FOXC2Q99958 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXC2Q99958 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXC2Q99958 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXC2Q99958 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXC2Q99958 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L2-201ENST00000561772 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FOXC2Q99958 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L6-201ENST00000626483 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L1-201ENST00000627662 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L8-201ENST00000629013 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L3-201ENST00000630187 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L7-201ENST00000630678 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 DUX4L5-201ENST00000630834 1275 ntBASIC19.42■□□□□ 0.7
FOXC2Q99958 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXC2Q99958 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FOXC2Q99958 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXC2Q99958 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXC2Q99958 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXC2Q99958 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXC2Q99958 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXC2Q99958 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXC2Q99958 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXC2Q99958 AL031602.1-201ENST00000633169 911 ntBASIC19.4■□□□□ 0.7
FOXC2Q99958 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXC2Q99958 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXC2Q99958 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXC2Q99958 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
FOXC2Q99958 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXC2Q99958 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXC2Q99958 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FOXC2Q99958 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXC2Q99958 AC123595.1-201ENST00000440769 1046 ntBASIC19.39■□□□□ 0.69
FOXC2Q99958 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXC2Q99958 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXC2Q99958 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.39■□□□□ 0.69
FOXC2Q99958 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
FOXC2Q99958 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FOXC2Q99958 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXC2Q99958 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXC2Q99958 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXC2Q99958 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXC2Q99958 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FOXC2Q99958 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXC2Q99958 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXC2Q99958 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
FOXC2Q99958 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms