Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNS1Q96KK3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNS1Q96KK3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNS1Q96KK3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
KCNS1Q96KK3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 AC025884.2-201ENST00000553429 711 ntBASIC17.4■□□□□ 0.38
KCNS1Q96KK3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNS1Q96KK3 SLC6A10P-202ENST00000431994 2058 ntBASIC17.4■□□□□ 0.38
KCNS1Q96KK3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.39■□□□□ 0.38
KCNS1Q96KK3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
KCNS1Q96KK3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNS1Q96KK3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNS1Q96KK3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNS1Q96KK3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNS1Q96KK3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNS1Q96KK3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNS1Q96KK3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 SMPD5-203ENST00000639008 1464 ntBASIC17.37■□□□□ 0.37
KCNS1Q96KK3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 AL157400.5-201ENST00000507624 621 ntBASIC17.37■□□□□ 0.37
KCNS1Q96KK3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 AC060814.1-201ENST00000554326 538 ntBASIC17.37■□□□□ 0.37
KCNS1Q96KK3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNS1Q96KK3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 AC004812.2-201ENST00000611079 2094 ntBASIC17.36■□□□□ 0.37
KCNS1Q96KK3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KCNS1Q96KK3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 AC127496.7-201ENST00000625110 1798 ntBASIC17.35■□□□□ 0.37
KCNS1Q96KK3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNS1Q96KK3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KCNS1Q96KK3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNS1Q96KK3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
KCNS1Q96KK3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms