Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMD4Q96H15 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.3■□□□□ 0.68
TIMD4Q96H15 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.3■□□□□ 0.68
TIMD4Q96H15 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMD4Q96H15 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMD4Q96H15 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 AL161729.1-201ENST00000604104 1402 ntBASIC19.29■□□□□ 0.68
TIMD4Q96H15 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.29■□□□□ 0.68
TIMD4Q96H15 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.29■□□□□ 0.68
TIMD4Q96H15 AC131281.2-201ENST00000520478 145 ntBASIC19.29■□□□□ 0.68
TIMD4Q96H15 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.29■□□□□ 0.68
TIMD4Q96H15 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.29■□□□□ 0.68
TIMD4Q96H15 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.29■□□□□ 0.68
TIMD4Q96H15 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMD4Q96H15 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.28■□□□□ 0.68
TIMD4Q96H15 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMD4Q96H15 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMD4Q96H15 AP003733.4-201ENST00000623785 1697 ntBASIC19.28■□□□□ 0.68
TIMD4Q96H15 AL136116.3-201ENST00000402907 1138 ntBASIC19.28■□□□□ 0.68
TIMD4Q96H15 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TIMD4Q96H15 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.28■□□□□ 0.68
TIMD4Q96H15 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TIMD4Q96H15 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.28■□□□□ 0.68
TIMD4Q96H15 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.28■□□□□ 0.68
TIMD4Q96H15 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMD4Q96H15 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TIMD4Q96H15 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TIMD4Q96H15 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMD4Q96H15 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
TIMD4Q96H15 AC131274.2-201ENST00000580697 1507 ntBASIC19.27■□□□□ 0.68
TIMD4Q96H15 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMD4Q96H15 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMD4Q96H15 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMD4Q96H15 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMD4Q96H15 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMD4Q96H15 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TIMD4Q96H15 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TIMD4Q96H15 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TIMD4Q96H15 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TIMD4Q96H15 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMD4Q96H15 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMD4Q96H15 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMD4Q96H15 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMD4Q96H15 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMD4Q96H15 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.26■□□□□ 0.67
TIMD4Q96H15 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMD4Q96H15 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TIMD4Q96H15 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMD4Q96H15 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMD4Q96H15 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMD4Q96H15 AC022211.4-201ENST00000625094 2161 ntBASIC19.25■□□□□ 0.67
TIMD4Q96H15 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMD4Q96H15 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.25■□□□□ 0.67
TIMD4Q96H15 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMD4Q96H15 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMD4Q96H15 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMD4Q96H15 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.25■□□□□ 0.67
TIMD4Q96H15 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMD4Q96H15 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMD4Q96H15 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMD4Q96H15 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.24■□□□□ 0.67
TIMD4Q96H15 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMD4Q96H15 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMD4Q96H15 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TIMD4Q96H15 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.23■□□□□ 0.67
TIMD4Q96H15 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.23■□□□□ 0.67
TIMD4Q96H15 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMD4Q96H15 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TIMD4Q96H15 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMD4Q96H15 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMD4Q96H15 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMD4Q96H15 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TIMD4Q96H15 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.22■□□□□ 0.67
TIMD4Q96H15 HLA-L-211ENST00000482052 1765 ntBASIC19.21■□□□□ 0.67
TIMD4Q96H15 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TIMD4Q96H15 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TIMD4Q96H15 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TIMD4Q96H15 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms