Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 FOXO3B-201ENST00000395675 1928 ntBASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 AL117328.2-201ENST00000624617 1940 ntBASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC47A1Q96FL8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC47A1Q96FL8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC47A1Q96FL8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC47A1Q96FL8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC47A1Q96FL8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC47A1Q96FL8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC47A1Q96FL8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 CLDN5-201ENST00000403084 2357 ntBASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC47A1Q96FL8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC47A1Q96FL8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC47A1Q96FL8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC47A1Q96FL8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 AC133552.2-201ENST00000619106 1032 ntBASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 AC009831.1-201ENST00000580420 1582 ntBASIC21.57■■□□□ 1.04
SLC47A1Q96FL8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC47A1Q96FL8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC47A1Q96FL8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC47A1Q96FL8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC47A1Q96FL8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC47A1Q96FL8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 AC233723.2-201ENST00000623798 2106 ntBASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC47A1Q96FL8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC47A1Q96FL8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC47A1Q96FL8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC47A1Q96FL8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC47A1Q96FL8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC47A1Q96FL8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC47A1Q96FL8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC47A1Q96FL8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC47A1Q96FL8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC47A1Q96FL8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC47A1Q96FL8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC47A1Q96FL8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC47A1Q96FL8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 ANOS2P-203ENST00000472227 1816 ntBASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms