Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TMEM54Q969K7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM54Q969K7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMEM54Q969K7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM54Q969K7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM54Q969K7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM54Q969K7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM54Q969K7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM54Q969K7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM54Q969K7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM54Q969K7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM54Q969K7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM54Q969K7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM54Q969K7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TMEM54Q969K7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM54Q969K7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM54Q969K7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM54Q969K7 ABCB10P4-201ENST00000566803 2184 ntBASIC20.3■□□□□ 0.84
TMEM54Q969K7 AC004448.1-201ENST00000458332 883 ntBASIC20.3■□□□□ 0.84
TMEM54Q969K7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM54Q969K7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM54Q969K7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM54Q969K7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM54Q969K7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM54Q969K7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM54Q969K7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM54Q969K7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TMEM54Q969K7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM54Q969K7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM54Q969K7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM54Q969K7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM54Q969K7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM54Q969K7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 AC021242.3-201ENST00000607598 1377 ntBASIC20.27■□□□□ 0.84
TMEM54Q969K7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM54Q969K7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 BX664725.1-201ENST00000438252 379 ntBASIC20.27■□□□□ 0.84
TMEM54Q969K7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TMEM54Q969K7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.27■□□□□ 0.83
TMEM54Q969K7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TMEM54Q969K7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM54Q969K7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM54Q969K7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM54Q969K7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM54Q969K7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM54Q969K7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TMEM54Q969K7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TMEM54Q969K7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TMEM54Q969K7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM54Q969K7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.26■□□□□ 0.83
TMEM54Q969K7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM54Q969K7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM54Q969K7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM54Q969K7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TMEM54Q969K7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM54Q969K7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.25■□□□□ 0.83
TMEM54Q969K7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM54Q969K7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 AL451085.2-201ENST00000605085 799 ntBASIC20.25■□□□□ 0.83
TMEM54Q969K7 SNX5-217ENST00000606557 1087 ntBASIC20.25■□□□□ 0.83
TMEM54Q969K7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM54Q969K7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM54Q969K7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM54Q969K7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM54Q969K7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM54Q969K7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM54Q969K7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.24■□□□□ 0.83
TMEM54Q969K7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.24■□□□□ 0.83
TMEM54Q969K7 Z92544.1-202ENST00000571933 1220 ntBASIC20.24■□□□□ 0.83
TMEM54Q969K7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM54Q969K7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM54Q969K7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms