Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTP4A1Q93096 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.64■□□□□ 0.89
PTP4A1Q93096 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PTP4A1Q93096 NTF6A-201ENST00000591175 560 ntBASIC20.64■□□□□ 0.89
PTP4A1Q93096 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.64■□□□□ 0.89
PTP4A1Q93096 AC090877.2-201ENST00000558441 1738 ntBASIC20.64■□□□□ 0.89
PTP4A1Q93096 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTP4A1Q93096 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTP4A1Q93096 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.63■□□□□ 0.89
PTP4A1Q93096 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTP4A1Q93096 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.61■□□□□ 0.89
PTP4A1Q93096 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.61■□□□□ 0.89
PTP4A1Q93096 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.61■□□□□ 0.89
PTP4A1Q93096 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 SPCS2P3-201ENST00000500401 656 ntBASIC20.61■□□□□ 0.89
PTP4A1Q93096 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 AC018755.3-202ENST00000596210 929 ntBASIC20.61■□□□□ 0.89
PTP4A1Q93096 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PTP4A1Q93096 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTP4A1Q93096 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTP4A1Q93096 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTP4A1Q93096 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.6■□□□□ 0.89
PTP4A1Q93096 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTP4A1Q93096 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTP4A1Q93096 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTP4A1Q93096 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.6■□□□□ 0.89
PTP4A1Q93096 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTP4A1Q93096 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PTP4A1Q93096 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTP4A1Q93096 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTP4A1Q93096 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTP4A1Q93096 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTP4A1Q93096 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTP4A1Q93096 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTP4A1Q93096 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTP4A1Q93096 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
PTP4A1Q93096 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTP4A1Q93096 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PTP4A1Q93096 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.58■□□□□ 0.89
PTP4A1Q93096 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTP4A1Q93096 KRT18P60-201ENST00000312876 1297 ntBASIC20.58■□□□□ 0.89
PTP4A1Q93096 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
PTP4A1Q93096 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTP4A1Q93096 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PTP4A1Q93096 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PTP4A1Q93096 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTP4A1Q93096 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTP4A1Q93096 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.57■□□□□ 0.88
PTP4A1Q93096 AC087393.1-201ENST00000582896 145 ntBASIC20.57■□□□□ 0.88
PTP4A1Q93096 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.57■□□□□ 0.88
PTP4A1Q93096 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PTP4A1Q93096 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 AC079834.2-201ENST00000609776 1949 ntBASIC20.57■□□□□ 0.88
PTP4A1Q93096 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTP4A1Q93096 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.56■□□□□ 0.88
PTP4A1Q93096 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.56■□□□□ 0.88
PTP4A1Q93096 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
PTP4A1Q93096 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PTP4A1Q93096 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 AC129492.7-201ENST00000622992 756 ntBASIC20.56■□□□□ 0.88
PTP4A1Q93096 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
PTP4A1Q93096 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A1Q93096 ANOS2P-203ENST00000472227 1816 ntBASIC20.55■□□□□ 0.88
PTP4A1Q93096 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTP4A1Q93096 AL592295.1-201ENST00000400984 884 ntBASIC20.55■□□□□ 0.88
PTP4A1Q93096 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.55■□□□□ 0.88
PTP4A1Q93096 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.55■□□□□ 0.88
PTP4A1Q93096 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTP4A1Q93096 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A1Q93096 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms