Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP9XQ93008 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.38■□□□□ 0.85
USP9XQ93008 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP9XQ93008 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.38■□□□□ 0.85
USP9XQ93008 BX842568.3-201ENST00000418104 571 ntBASIC20.38■□□□□ 0.85
USP9XQ93008 AC092171.4-201ENST00000609130 632 ntBASIC20.38■□□□□ 0.85
USP9XQ93008 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP9XQ93008 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
USP9XQ93008 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP9XQ93008 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP9XQ93008 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP9XQ93008 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP9XQ93008 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.37■□□□□ 0.85
USP9XQ93008 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP9XQ93008 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.37■□□□□ 0.85
USP9XQ93008 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.36■□□□□ 0.85
USP9XQ93008 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.36■□□□□ 0.85
USP9XQ93008 TMEM191A-211ENST00000637163 1067 ntBASIC20.36■□□□□ 0.85
USP9XQ93008 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP9XQ93008 AC142472.1-201ENST00000612013 1741 ntBASIC20.36■□□□□ 0.85
USP9XQ93008 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
USP9XQ93008 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP9XQ93008 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP9XQ93008 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP9XQ93008 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP9XQ93008 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.36■□□□□ 0.85
USP9XQ93008 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.36■□□□□ 0.85
USP9XQ93008 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.36■□□□□ 0.85
USP9XQ93008 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.35■□□□□ 0.85
USP9XQ93008 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 CCDC92B-201ENST00000575506 885 ntBASIC20.35■□□□□ 0.85
USP9XQ93008 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
USP9XQ93008 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP9XQ93008 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.35■□□□□ 0.85
USP9XQ93008 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
USP9XQ93008 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.35■□□□□ 0.85
USP9XQ93008 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.34■□□□□ 0.85
USP9XQ93008 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP9XQ93008 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP9XQ93008 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.34■□□□□ 0.85
USP9XQ93008 MIR3181-201ENST00000578512 73 ntBASIC20.34■□□□□ 0.85
USP9XQ93008 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP9XQ93008 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.34■□□□□ 0.85
USP9XQ93008 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP9XQ93008 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP9XQ93008 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
USP9XQ93008 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.33■□□□□ 0.85
USP9XQ93008 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.33■□□□□ 0.85
USP9XQ93008 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
USP9XQ93008 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP9XQ93008 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP9XQ93008 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP9XQ93008 AC104771.1-201ENST00000603335 964 ntBASIC20.33■□□□□ 0.84
USP9XQ93008 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP9XQ93008 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.32■□□□□ 0.84
USP9XQ93008 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.32■□□□□ 0.84
USP9XQ93008 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.32■□□□□ 0.84
USP9XQ93008 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.32■□□□□ 0.84
USP9XQ93008 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP9XQ93008 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP9XQ93008 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.32■□□□□ 0.84
USP9XQ93008 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.32■□□□□ 0.84
USP9XQ93008 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.32■□□□□ 0.84
USP9XQ93008 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.32■□□□□ 0.84
USP9XQ93008 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.32■□□□□ 0.84
USP9XQ93008 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.32■□□□□ 0.84
USP9XQ93008 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP9XQ93008 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP9XQ93008 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.31■□□□□ 0.84
USP9XQ93008 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP9XQ93008 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.31■□□□□ 0.84
USP9XQ93008 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.31■□□□□ 0.84
USP9XQ93008 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.31■□□□□ 0.84
USP9XQ93008 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
USP9XQ93008 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP9XQ93008 AC093827.2-201ENST00000512654 315 ntBASIC20.3■□□□□ 0.84
USP9XQ93008 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 TSPY26P-201ENST00000476365 1326 ntBASIC20.3■□□□□ 0.84
USP9XQ93008 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP9XQ93008 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.3■□□□□ 0.84
USP9XQ93008 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
USP9XQ93008 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.29■□□□□ 0.84
USP9XQ93008 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.29■□□□□ 0.84
USP9XQ93008 NTF6G-201ENST00000591094 616 ntBASIC20.29■□□□□ 0.84
USP9XQ93008 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP9XQ93008 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP9XQ93008 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.29■□□□□ 0.84
USP9XQ93008 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.29■□□□□ 0.84
USP9XQ93008 KRT18P14-201ENST00000534205 1250 ntBASIC20.29■□□□□ 0.84
USP9XQ93008 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms