Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PRUNE2Q8WUY3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PRUNE2Q8WUY3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.48■■□□□ 1.51
PRUNE2Q8WUY3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.48■■□□□ 1.51
PRUNE2Q8WUY3 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.48■■□□□ 1.51
PRUNE2Q8WUY3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRUNE2Q8WUY3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.46■■□□□ 1.51
PRUNE2Q8WUY3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRUNE2Q8WUY3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.46■■□□□ 1.51
PRUNE2Q8WUY3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRUNE2Q8WUY3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRUNE2Q8WUY3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRUNE2Q8WUY3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
PRUNE2Q8WUY3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.45■■□□□ 1.51
PRUNE2Q8WUY3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 TMEM191A-211ENST00000637163 1067 ntBASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 AC005703.6-201ENST00000623265 1329 ntBASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 AC006015.1-201ENST00000429970 570 ntBASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 KRT18P14-201ENST00000534205 1250 ntBASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRUNE2Q8WUY3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRUNE2Q8WUY3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRUNE2Q8WUY3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 CROCCP5-201ENST00000436658 830 ntBASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PRUNE2Q8WUY3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 TSPY26P-201ENST00000476365 1326 ntBASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 AL499627.2-201ENST00000606283 725 ntBASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 NTF6G-201ENST00000591094 616 ntBASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 C17orf82-201ENST00000623772 1530 ntBASIC24.42■■□□□ 1.5
PRUNE2Q8WUY3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.41■■□□□ 1.5
PRUNE2Q8WUY3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRUNE2Q8WUY3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 KRT18P61-201ENST00000585825 1298 ntBASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 AC073111.5-205ENST00000641717 521 ntBASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRUNE2Q8WUY3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 AC026185.1-201ENST00000445748 174 ntBASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRUNE2Q8WUY3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 AC009102.2-201ENST00000606772 1639 ntBASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 AC006455.2-201ENST00000429931 906 ntBASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
PRUNE2Q8WUY3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRUNE2Q8WUY3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRUNE2Q8WUY3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.35■■□□□ 1.49
PRUNE2Q8WUY3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRUNE2Q8WUY3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PRUNE2Q8WUY3 NCF1B-203ENST00000435988 1254 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms