Protein–RNA interactions for Protein: Q8WUH2

TGFBRAP1, Transforming growth factor-beta receptor-associated protein 1, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1Q8WUH2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TGFBRAP1Q8WUH2 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
TGFBRAP1Q8WUH2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 AL022069.1-201ENST00000568025 1636 ntBASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TGFBRAP1Q8WUH2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 HLA-L-211ENST00000482052 1765 ntBASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.46■■□□□ 1.99
TGFBRAP1Q8WUH2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
TGFBRAP1Q8WUH2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.45■■□□□ 1.99
TGFBRAP1Q8WUH2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
TGFBRAP1Q8WUH2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TGFBRAP1Q8WUH2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.45■■□□□ 1.98
TGFBRAP1Q8WUH2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.45■■□□□ 1.98
TGFBRAP1Q8WUH2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TGFBRAP1Q8WUH2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
TGFBRAP1Q8WUH2 AC022211.4-201ENST00000625094 2161 ntBASIC27.45■■□□□ 1.98
TGFBRAP1Q8WUH2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TGFBRAP1Q8WUH2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TGFBRAP1Q8WUH2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.44■■□□□ 1.98
TGFBRAP1Q8WUH2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.44■■□□□ 1.98
TGFBRAP1Q8WUH2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
TGFBRAP1Q8WUH2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TGFBRAP1Q8WUH2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
TGFBRAP1Q8WUH2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.43■■□□□ 1.98
TGFBRAP1Q8WUH2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TGFBRAP1Q8WUH2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.43■■□□□ 1.98
TGFBRAP1Q8WUH2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
TGFBRAP1Q8WUH2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TGFBRAP1Q8WUH2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.42■■□□□ 1.98
TGFBRAP1Q8WUH2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TGFBRAP1Q8WUH2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TGFBRAP1Q8WUH2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TGFBRAP1Q8WUH2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.41■■□□□ 1.98
TGFBRAP1Q8WUH2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TGFBRAP1Q8WUH2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TGFBRAP1Q8WUH2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.41■■□□□ 1.98
TGFBRAP1Q8WUH2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.41■■□□□ 1.98
TGFBRAP1Q8WUH2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
TGFBRAP1Q8WUH2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TGFBRAP1Q8WUH2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TGFBRAP1Q8WUH2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TGFBRAP1Q8WUH2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TGFBRAP1Q8WUH2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 SRD5A1P1-201ENST00000442297 786 ntBASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TGFBRAP1Q8WUH2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TGFBRAP1Q8WUH2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TGFBRAP1Q8WUH2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TGFBRAP1Q8WUH2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.37■■□□□ 1.97
TGFBRAP1Q8WUH2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TGFBRAP1Q8WUH2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TGFBRAP1Q8WUH2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
TGFBRAP1Q8WUH2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.36■■□□□ 1.97
TGFBRAP1Q8WUH2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TGFBRAP1Q8WUH2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TGFBRAP1Q8WUH2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27.36■■□□□ 1.97
TGFBRAP1Q8WUH2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms