Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.98■■□□□ 1.91
SMARCC2Q8TAQ2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.97■■□□□ 1.91
SMARCC2Q8TAQ2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMARCC2Q8TAQ2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMARCC2Q8TAQ2 AC011551.1-201ENST00000614101 683 ntBASIC26.96■■□□□ 1.91
SMARCC2Q8TAQ2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SMARCC2Q8TAQ2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
SMARCC2Q8TAQ2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
SMARCC2Q8TAQ2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
SMARCC2Q8TAQ2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SMARCC2Q8TAQ2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMARCC2Q8TAQ2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMARCC2Q8TAQ2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.95■■□□□ 1.9
SMARCC2Q8TAQ2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMARCC2Q8TAQ2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SMARCC2Q8TAQ2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
SMARCC2Q8TAQ2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMARCC2Q8TAQ2 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.94■■□□□ 1.9
SMARCC2Q8TAQ2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SMARCC2Q8TAQ2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 AC239859.2-201ENST00000444165 318 ntBASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.93■■□□□ 1.9
SMARCC2Q8TAQ2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 MIR4281-201ENST00000580852 62 ntBASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
SMARCC2Q8TAQ2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 BX664725.1-201ENST00000438252 379 ntBASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 Z92544.1-202ENST00000571933 1220 ntBASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCC2Q8TAQ2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCC2Q8TAQ2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCC2Q8TAQ2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
SMARCC2Q8TAQ2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCC2Q8TAQ2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.89■■□□□ 1.9
SMARCC2Q8TAQ2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
SMARCC2Q8TAQ2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCC2Q8TAQ2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCC2Q8TAQ2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCC2Q8TAQ2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCC2Q8TAQ2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCC2Q8TAQ2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms