Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
CFAP43Q8NDM7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CFAP43Q8NDM7 AC145676.1-201ENST00000514988 2004 ntBASIC36.46■■■■□ 3.43
CFAP43Q8NDM7 DUX4L19-201ENST00000557448 1267 ntBASIC36.46■■■■□ 3.43
CFAP43Q8NDM7 RARRES2P11-201ENST00000635158 484 ntBASIC36.46■■■■□ 3.43
CFAP43Q8NDM7 CA15P2-201ENST00000611168 834 ntBASIC36.45■■■■□ 3.43
CFAP43Q8NDM7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC36.45■■■■□ 3.43
CFAP43Q8NDM7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC36.45■■■■□ 3.43
CFAP43Q8NDM7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC36.45■■■■□ 3.42
CFAP43Q8NDM7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC36.45■■■■□ 3.42
CFAP43Q8NDM7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC36.45■■■■□ 3.42
CFAP43Q8NDM7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC36.44■■■■□ 3.42
CFAP43Q8NDM7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CFAP43Q8NDM7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC36.43■■■■□ 3.42
CFAP43Q8NDM7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC36.43■■■■□ 3.42
CFAP43Q8NDM7 MIR4767-201ENST00000582827 78 ntBASIC36.43■■■■□ 3.42
CFAP43Q8NDM7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC36.43■■■■□ 3.42
CFAP43Q8NDM7 RASA4CP-201ENST00000424092 1398 ntBASIC36.43■■■■□ 3.42
CFAP43Q8NDM7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CFAP43Q8NDM7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC36.42■■■■□ 3.42
CFAP43Q8NDM7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CFAP43Q8NDM7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CFAP43Q8NDM7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CFAP43Q8NDM7 AC027682.1-201ENST00000562846 899 ntBASIC36.42■■■■□ 3.42
CFAP43Q8NDM7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CFAP43Q8NDM7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC36.41■■■■□ 3.42
CFAP43Q8NDM7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC36.41■■■■□ 3.42
CFAP43Q8NDM7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC36.4■■■■□ 3.42
CFAP43Q8NDM7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC36.4■■■■□ 3.42
CFAP43Q8NDM7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
CFAP43Q8NDM7 AC131274.2-201ENST00000580697 1507 ntBASIC36.4■■■■□ 3.42
CFAP43Q8NDM7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 MAG-206ENST00000597035 542 ntTSL 4 BASIC36.39■■■■□ 3.42
CFAP43Q8NDM7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CFAP43Q8NDM7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
CFAP43Q8NDM7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
CFAP43Q8NDM7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC36.38■■■■□ 3.41
CFAP43Q8NDM7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
CFAP43Q8NDM7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CFAP43Q8NDM7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC36.37■■■■□ 3.41
CFAP43Q8NDM7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CFAP43Q8NDM7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 SLC6A10P-202ENST00000431994 2058 ntBASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CFAP43Q8NDM7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC36.35■■■■□ 3.41
CFAP43Q8NDM7 LBH-205ENST00000407930 756 ntTSL 2 BASIC36.35■■■■□ 3.41
CFAP43Q8NDM7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC36.34■■■■□ 3.41
CFAP43Q8NDM7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CFAP43Q8NDM7 AC004448.1-201ENST00000458332 883 ntBASIC36.34■■■■□ 3.41
CFAP43Q8NDM7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CFAP43Q8NDM7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC36.34■■■■□ 3.41
CFAP43Q8NDM7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC36.33■■■■□ 3.41
CFAP43Q8NDM7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC36.33■■■■□ 3.41
CFAP43Q8NDM7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC36.33■■■■□ 3.41
CFAP43Q8NDM7 IKBKGP1-201ENST00000612193 1073 ntBASIC36.33■■■■□ 3.41
CFAP43Q8NDM7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
CFAP43Q8NDM7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC36.33■■■■□ 3.41
CFAP43Q8NDM7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC36.32■■■■□ 3.41
CFAP43Q8NDM7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC36.32■■■■□ 3.41
CFAP43Q8NDM7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC36.32■■■■□ 3.41
CFAP43Q8NDM7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.41
CFAP43Q8NDM7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC36.32■■■■□ 3.41
CFAP43Q8NDM7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC36.32■■■■□ 3.4
CFAP43Q8NDM7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CFAP43Q8NDM7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC36.3■■■■□ 3.4
CFAP43Q8NDM7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC36.3■■■■□ 3.4
CFAP43Q8NDM7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC36.3■■■■□ 3.4
CFAP43Q8NDM7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC36.3■■■■□ 3.4
CFAP43Q8NDM7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CFAP43Q8NDM7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC36.29■■■■□ 3.4
CFAP43Q8NDM7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CFAP43Q8NDM7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CFAP43Q8NDM7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CFAP43Q8NDM7 PTCHD3P2-201ENST00000424937 1205 ntBASIC36.29■■■■□ 3.4
CFAP43Q8NDM7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
CFAP43Q8NDM7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC36.28■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms