Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC168Q8NDH2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC168Q8NDH2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC168Q8NDH2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC168Q8NDH2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC168Q8NDH2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 TERF1P2-201ENST00000583350 1212 ntBASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC168Q8NDH2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 NTF6G-201ENST00000591094 616 ntBASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC168Q8NDH2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 CCDC92B-201ENST00000575506 885 ntBASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC168Q8NDH2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC168Q8NDH2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC168Q8NDH2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC168Q8NDH2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC168Q8NDH2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC168Q8NDH2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC168Q8NDH2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 AC093827.2-201ENST00000512654 315 ntBASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 AC104771.1-201ENST00000603335 964 ntBASIC19.44■□□□□ 0.7
CCDC168Q8NDH2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 CDCA4P2-201ENST00000441182 718 ntBASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC168Q8NDH2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 MIR3181-201ENST00000578512 73 ntBASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 TMEM191A-211ENST00000637163 1067 ntBASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC168Q8NDH2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 TSPY26P-201ENST00000476365 1326 ntBASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 KRT18P14-201ENST00000534205 1250 ntBASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 AC241377.3-202ENST00000626088 1088 ntBASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 AC241585.3-202ENST00000628937 1088 ntBASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 AC245100.8-202ENST00000629247 1058 ntBASIC19.41■□□□□ 0.7
CCDC168Q8NDH2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC168Q8NDH2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC168Q8NDH2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms