Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC39CQ8N584 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39CQ8N584 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TTC39CQ8N584 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39CQ8N584 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
TTC39CQ8N584 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC39CQ8N584 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39CQ8N584 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.5■■□□□ 1.51
TTC39CQ8N584 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.5■■□□□ 1.51
TTC39CQ8N584 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39CQ8N584 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39CQ8N584 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.49■■□□□ 1.51
TTC39CQ8N584 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.49■■□□□ 1.51
TTC39CQ8N584 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39CQ8N584 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.49■■□□□ 1.51
TTC39CQ8N584 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC39CQ8N584 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39CQ8N584 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39CQ8N584 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39CQ8N584 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39CQ8N584 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39CQ8N584 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39CQ8N584 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39CQ8N584 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC39CQ8N584 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39CQ8N584 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TTC39CQ8N584 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC39CQ8N584 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TTC39CQ8N584 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.47■■□□□ 1.51
TTC39CQ8N584 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39CQ8N584 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TTC39CQ8N584 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TTC39CQ8N584 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TTC39CQ8N584 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TTC39CQ8N584 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
TTC39CQ8N584 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
TTC39CQ8N584 GUSBP5-201ENST00000418136 578 ntBASIC24.46■■□□□ 1.51
TTC39CQ8N584 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.46■■□□□ 1.51
TTC39CQ8N584 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TTC39CQ8N584 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TTC39CQ8N584 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
TTC39CQ8N584 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39CQ8N584 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39CQ8N584 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.45■■□□□ 1.5
TTC39CQ8N584 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.45■■□□□ 1.5
TTC39CQ8N584 MTDHP2-201ENST00000601468 714 ntBASIC24.45■■□□□ 1.5
TTC39CQ8N584 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39CQ8N584 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.44■■□□□ 1.5
TTC39CQ8N584 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.44■■□□□ 1.5
TTC39CQ8N584 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
TTC39CQ8N584 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39CQ8N584 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39CQ8N584 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39CQ8N584 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TTC39CQ8N584 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39CQ8N584 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39CQ8N584 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39CQ8N584 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39CQ8N584 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39CQ8N584 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TTC39CQ8N584 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TTC39CQ8N584 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TTC39CQ8N584 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39CQ8N584 ALDH1A3-203ENST00000557963 1670 ntBASIC24.43■■□□□ 1.5
TTC39CQ8N584 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39CQ8N584 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC39CQ8N584 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.42■■□□□ 1.5
TTC39CQ8N584 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39CQ8N584 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39CQ8N584 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.42■■□□□ 1.5
TTC39CQ8N584 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC39CQ8N584 AC010997.5-201ENST00000609182 354 ntBASIC24.42■■□□□ 1.5
TTC39CQ8N584 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39CQ8N584 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39CQ8N584 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39CQ8N584 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39CQ8N584 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39CQ8N584 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39CQ8N584 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
TTC39CQ8N584 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.41■■□□□ 1.5
TTC39CQ8N584 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.41■■□□□ 1.5
TTC39CQ8N584 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.41■■□□□ 1.5
TTC39CQ8N584 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.41■■□□□ 1.5
TTC39CQ8N584 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39CQ8N584 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TTC39CQ8N584 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms