Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.33■■□□□ 1.33
PGBD3Q8N328 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PGBD3Q8N328 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.33■■□□□ 1.33
PGBD3Q8N328 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PGBD3Q8N328 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PGBD3Q8N328 AC005703.6-201ENST00000623265 1329 ntBASIC23.33■■□□□ 1.32
PGBD3Q8N328 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
PGBD3Q8N328 AC024257.2-201ENST00000549699 147 ntBASIC23.32■■□□□ 1.32
PGBD3Q8N328 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PGBD3Q8N328 DUSP8P4-201ENST00000399538 1761 ntBASIC23.32■■□□□ 1.32
PGBD3Q8N328 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PGBD3Q8N328 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PGBD3Q8N328 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PGBD3Q8N328 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.31■■□□□ 1.32
PGBD3Q8N328 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.31■■□□□ 1.32
PGBD3Q8N328 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PGBD3Q8N328 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PGBD3Q8N328 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PGBD3Q8N328 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PGBD3Q8N328 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.3■■□□□ 1.32
PGBD3Q8N328 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.3■■□□□ 1.32
PGBD3Q8N328 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PGBD3Q8N328 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PGBD3Q8N328 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PGBD3Q8N328 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.29■■□□□ 1.32
PGBD3Q8N328 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PGBD3Q8N328 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PGBD3Q8N328 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.29■■□□□ 1.32
PGBD3Q8N328 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PGBD3Q8N328 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PGBD3Q8N328 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.29■■□□□ 1.32
PGBD3Q8N328 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PGBD3Q8N328 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PGBD3Q8N328 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 AL355001.2-201ENST00000620617 1191 ntBASIC23.28■■□□□ 1.32
PGBD3Q8N328 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PGBD3Q8N328 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PGBD3Q8N328 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PGBD3Q8N328 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PGBD3Q8N328 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PGBD3Q8N328 EDA-201ENST00000338901 1233 ntBASIC23.27■■□□□ 1.32
PGBD3Q8N328 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PGBD3Q8N328 SUDS3P1-201ENST00000505831 966 ntBASIC23.27■■□□□ 1.32
PGBD3Q8N328 RARRES2P6-201ENST00000567333 442 ntBASIC23.27■■□□□ 1.32
PGBD3Q8N328 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PGBD3Q8N328 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
PGBD3Q8N328 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PGBD3Q8N328 AC020928.2-201ENST00000588717 2197 ntBASIC23.26■■□□□ 1.31
PGBD3Q8N328 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PGBD3Q8N328 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.26■■□□□ 1.31
PGBD3Q8N328 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.26■■□□□ 1.31
PGBD3Q8N328 AC092803.2-201ENST00000564287 1899 ntBASIC23.26■■□□□ 1.31
PGBD3Q8N328 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.26■■□□□ 1.31
PGBD3Q8N328 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.26■■□□□ 1.31
PGBD3Q8N328 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PGBD3Q8N328 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 DUX4L19-201ENST00000557448 1267 ntBASIC23.25■■□□□ 1.31
PGBD3Q8N328 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 AL031432.3-201ENST00000607698 485 ntBASIC23.25■■□□□ 1.31
PGBD3Q8N328 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PGBD3Q8N328 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.25■■□□□ 1.31
PGBD3Q8N328 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PGBD3Q8N328 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PGBD3Q8N328 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGBD3Q8N328 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PGBD3Q8N328 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGBD3Q8N328 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.24■■□□□ 1.31
PGBD3Q8N328 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
PGBD3Q8N328 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.24■■□□□ 1.31
PGBD3Q8N328 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.24■■□□□ 1.31
PGBD3Q8N328 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.24■■□□□ 1.31
PGBD3Q8N328 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PGBD3Q8N328 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms