Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.39■■■□□ 2.3
COL23A1Q86Y22 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.39■■■□□ 2.3
COL23A1Q86Y22 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.39■■■□□ 2.3
COL23A1Q86Y22 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.39■■■□□ 2.3
COL23A1Q86Y22 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL23A1Q86Y22 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
COL23A1Q86Y22 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL23A1Q86Y22 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
COL23A1Q86Y22 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.38■■■□□ 2.29
COL23A1Q86Y22 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL23A1Q86Y22 BX842568.3-201ENST00000418104 571 ntBASIC29.38■■■□□ 2.29
COL23A1Q86Y22 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.38■■■□□ 2.29
COL23A1Q86Y22 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
COL23A1Q86Y22 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
COL23A1Q86Y22 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL23A1Q86Y22 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL23A1Q86Y22 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.37■■■□□ 2.29
COL23A1Q86Y22 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL23A1Q86Y22 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
COL23A1Q86Y22 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
COL23A1Q86Y22 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 AC006455.2-201ENST00000429931 906 ntBASIC29.35■■■□□ 2.29
COL23A1Q86Y22 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
COL23A1Q86Y22 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
COL23A1Q86Y22 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
COL23A1Q86Y22 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
COL23A1Q86Y22 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL23A1Q86Y22 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL23A1Q86Y22 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL23A1Q86Y22 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL23A1Q86Y22 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.31■■■□□ 2.28
COL23A1Q86Y22 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.3■■■□□ 2.28
COL23A1Q86Y22 C17orf82-201ENST00000623772 1530 ntBASIC29.3■■■□□ 2.28
COL23A1Q86Y22 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.3■■■□□ 2.28
COL23A1Q86Y22 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
COL23A1Q86Y22 AC131274.2-201ENST00000580697 1507 ntBASIC29.3■■■□□ 2.28
COL23A1Q86Y22 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 MIR3181-201ENST00000578512 73 ntBASIC29.29■■■□□ 2.28
COL23A1Q86Y22 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
COL23A1Q86Y22 AC097639.1-201ENST00000565519 1891 ntBASIC29.29■■■□□ 2.28
COL23A1Q86Y22 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 AC241377.3-202ENST00000626088 1088 ntBASIC29.28■■■□□ 2.28
COL23A1Q86Y22 AC241585.3-202ENST00000628937 1088 ntBASIC29.28■■■□□ 2.28
COL23A1Q86Y22 AC245100.8-202ENST00000629247 1058 ntBASIC29.28■■■□□ 2.28
COL23A1Q86Y22 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.28■■■□□ 2.28
COL23A1Q86Y22 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.27■■■□□ 2.28
COL23A1Q86Y22 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
COL23A1Q86Y22 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.27■■■□□ 2.28
COL23A1Q86Y22 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.27■■■□□ 2.28
COL23A1Q86Y22 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.27■■■□□ 2.28
COL23A1Q86Y22 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.26■■■□□ 2.28
COL23A1Q86Y22 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
COL23A1Q86Y22 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.26■■■□□ 2.27
COL23A1Q86Y22 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.26■■■□□ 2.27
COL23A1Q86Y22 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms