Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RARRES2P6-201ENST00000567333 442 ntBASIC26.47■■□□□ 1.83
SH3RF1Q7Z6J0 MIR6089-201ENST00000616698 64 ntBASIC26.47■■□□□ 1.83
SH3RF1Q7Z6J0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.47■■□□□ 1.83
SH3RF1Q7Z6J0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SH3RF1Q7Z6J0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH3RF1Q7Z6J0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 AL512631.2-201ENST00000604634 923 ntBASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH3RF1Q7Z6J0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.45■■□□□ 1.83
SH3RF1Q7Z6J0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SH3RF1Q7Z6J0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.83
SH3RF1Q7Z6J0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.45■■□□□ 1.82
SH3RF1Q7Z6J0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF1Q7Z6J0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 LINC01124-201ENST00000409786 2117 ntBASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.44■■□□□ 1.82
SH3RF1Q7Z6J0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.43■■□□□ 1.82
SH3RF1Q7Z6J0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3RF1Q7Z6J0 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.42■■□□□ 1.82
SH3RF1Q7Z6J0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3RF1Q7Z6J0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3RF1Q7Z6J0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH3RF1Q7Z6J0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.41■■□□□ 1.82
SH3RF1Q7Z6J0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF1Q7Z6J0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.41■■□□□ 1.82
SH3RF1Q7Z6J0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3RF1Q7Z6J0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.4■■□□□ 1.82
SH3RF1Q7Z6J0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH3RF1Q7Z6J0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.4■■□□□ 1.82
SH3RF1Q7Z6J0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.4■■□□□ 1.82
SH3RF1Q7Z6J0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 AC026271.2-201ENST00000428091 497 ntBASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SH3RF1Q7Z6J0 LINC00543-201ENST00000567234 1845 ntBASIC26.39■■□□□ 1.81
SH3RF1Q7Z6J0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
SH3RF1Q7Z6J0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SH3RF1Q7Z6J0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH3RF1Q7Z6J0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH3RF1Q7Z6J0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SH3RF1Q7Z6J0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.38■■□□□ 1.81
SH3RF1Q7Z6J0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SH3RF1Q7Z6J0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH3RF1Q7Z6J0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH3RF1Q7Z6J0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF1Q7Z6J0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SH3RF1Q7Z6J0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.35■■□□□ 1.81
SH3RF1Q7Z6J0 PBX2P1-201ENST00000493219 1291 ntBASIC26.35■■□□□ 1.81
SH3RF1Q7Z6J0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
SH3RF1Q7Z6J0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 AC106739.1-201ENST00000617035 715 ntBASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF1Q7Z6J0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF1Q7Z6J0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms