Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 IRS3P-201ENST00000223076 1006 ntBASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPNS3Q6ZMD2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SPNS3Q6ZMD2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPNS3Q6ZMD2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.83■□□□□ 0.77
SPNS3Q6ZMD2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.83■□□□□ 0.77
SPNS3Q6ZMD2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPNS3Q6ZMD2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPNS3Q6ZMD2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.82■□□□□ 0.76
SPNS3Q6ZMD2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 AC034268.1-201ENST00000441047 882 ntBASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.81■□□□□ 0.76
SPNS3Q6ZMD2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPNS3Q6ZMD2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 AF131216.4-201ENST00000638924 1588 ntBASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 AC027682.1-201ENST00000562846 899 ntBASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.79■□□□□ 0.76
SPNS3Q6ZMD2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 AC091060.1-201ENST00000623524 1766 ntBASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPNS3Q6ZMD2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.77■□□□□ 0.76
SPNS3Q6ZMD2 AC020928.2-201ENST00000588717 2197 ntBASIC19.77■□□□□ 0.75
SPNS3Q6ZMD2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 MIR4767-201ENST00000582827 78 ntBASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPNS3Q6ZMD2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 AC092171.4-201ENST00000609130 632 ntBASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 AC092437.1-201ENST00000624794 1048 ntBASIC19.75■□□□□ 0.75
SPNS3Q6ZMD2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms