Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 AL117332.1-201ENST00000622628 974 ntBASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
GDPD4Q6W3E5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GDPD4Q6W3E5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 MIR3621-201ENST00000580529 85 ntBASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 AL356740.2-201ENST00000601559 647 ntBASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 AL161729.1-201ENST00000604104 1402 ntBASIC23.16■■□□□ 1.3
GDPD4Q6W3E5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 AC135731.1-201ENST00000569415 2548 ntBASIC23.15■■□□□ 1.3
GDPD4Q6W3E5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
GDPD4Q6W3E5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.14■■□□□ 1.3
GDPD4Q6W3E5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.14■■□□□ 1.29
GDPD4Q6W3E5 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.14■■□□□ 1.29
GDPD4Q6W3E5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.14■■□□□ 1.29
GDPD4Q6W3E5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GDPD4Q6W3E5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GDPD4Q6W3E5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.12■■□□□ 1.29
GDPD4Q6W3E5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.12■■□□□ 1.29
GDPD4Q6W3E5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.12■■□□□ 1.29
GDPD4Q6W3E5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.12■■□□□ 1.29
GDPD4Q6W3E5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.12■■□□□ 1.29
GDPD4Q6W3E5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.12■■□□□ 1.29
GDPD4Q6W3E5 AC005703.6-201ENST00000623265 1329 ntBASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
GDPD4Q6W3E5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 AC008406.3-201ENST00000620001 1374 ntBASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GDPD4Q6W3E5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDPD4Q6W3E5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
GDPD4Q6W3E5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.08■■□□□ 1.29
GDPD4Q6W3E5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.08■■□□□ 1.29
GDPD4Q6W3E5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
GDPD4Q6W3E5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
GDPD4Q6W3E5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
GDPD4Q6W3E5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms