Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC1Q6VVB1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC1Q6VVB1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NHLRC1Q6VVB1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC1Q6VVB1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
NHLRC1Q6VVB1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NHLRC1Q6VVB1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NHLRC1Q6VVB1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.63■□□□□ 0.89
NHLRC1Q6VVB1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NHLRC1Q6VVB1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NHLRC1Q6VVB1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NHLRC1Q6VVB1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC1Q6VVB1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 AF131216.4-201ENST00000638924 1588 ntBASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 AC103724.3-201ENST00000564481 992 ntBASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC1Q6VVB1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NHLRC1Q6VVB1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NHLRC1Q6VVB1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NHLRC1Q6VVB1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NHLRC1Q6VVB1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NHLRC1Q6VVB1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NHLRC1Q6VVB1 MIR4281-201ENST00000580852 62 ntBASIC20.59■□□□□ 0.89
NHLRC1Q6VVB1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.58■□□□□ 0.89
NHLRC1Q6VVB1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NHLRC1Q6VVB1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NHLRC1Q6VVB1 THA1P-201ENST00000590384 1145 ntBASIC20.58■□□□□ 0.89
NHLRC1Q6VVB1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.58■□□□□ 0.89
NHLRC1Q6VVB1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NHLRC1Q6VVB1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NHLRC1Q6VVB1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.58■□□□□ 0.88
NHLRC1Q6VVB1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NHLRC1Q6VVB1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.58■□□□□ 0.88
NHLRC1Q6VVB1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 AC131274.2-201ENST00000580697 1507 ntBASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NHLRC1Q6VVB1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 KRT8P33-201ENST00000508125 1423 ntBASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NHLRC1Q6VVB1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 AL161729.1-201ENST00000604104 1402 ntBASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NHLRC1Q6VVB1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NHLRC1Q6VVB1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NHLRC1Q6VVB1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
NHLRC1Q6VVB1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms