Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXR1Q6PIV2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 AC139795.1-202ENST00000500444 432 ntBASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXR1Q6PIV2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FOXR1Q6PIV2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 AC025884.2-201ENST00000553429 711 ntBASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXR1Q6PIV2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXR1Q6PIV2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
FOXR1Q6PIV2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 SPCS2P3-201ENST00000500401 656 ntBASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.74■■□□□ 1.39
FOXR1Q6PIV2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FOXR1Q6PIV2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 AC141586.4-201ENST00000624558 1573 ntBASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
FOXR1Q6PIV2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
FOXR1Q6PIV2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
FOXR1Q6PIV2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms