Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.45■■■□□ 2.31
RC3H1Q5TC82 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RC3H1Q5TC82 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
RC3H1Q5TC82 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RC3H1Q5TC82 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.45■■■□□ 2.31
RC3H1Q5TC82 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RC3H1Q5TC82 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RC3H1Q5TC82 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.44■■■□□ 2.3
RC3H1Q5TC82 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
RC3H1Q5TC82 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.43■■■□□ 2.3
RC3H1Q5TC82 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.43■■■□□ 2.3
RC3H1Q5TC82 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.43■■■□□ 2.3
RC3H1Q5TC82 AC136469.2-201ENST00000623944 1028 ntBASIC29.43■■■□□ 2.3
RC3H1Q5TC82 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.43■■■□□ 2.3
RC3H1Q5TC82 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RC3H1Q5TC82 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
RC3H1Q5TC82 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.41■■■□□ 2.3
RC3H1Q5TC82 AC241377.3-202ENST00000626088 1088 ntBASIC29.41■■■□□ 2.3
RC3H1Q5TC82 AC241585.3-202ENST00000628937 1088 ntBASIC29.41■■■□□ 2.3
RC3H1Q5TC82 AC245100.8-202ENST00000629247 1058 ntBASIC29.41■■■□□ 2.3
RC3H1Q5TC82 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RC3H1Q5TC82 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RC3H1Q5TC82 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 C17orf82-201ENST00000623772 1530 ntBASIC29.4■■■□□ 2.3
RC3H1Q5TC82 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RC3H1Q5TC82 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RC3H1Q5TC82 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.39■■■□□ 2.3
RC3H1Q5TC82 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RC3H1Q5TC82 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RC3H1Q5TC82 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.39■■■□□ 2.3
RC3H1Q5TC82 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RC3H1Q5TC82 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RC3H1Q5TC82 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.38■■■□□ 2.29
RC3H1Q5TC82 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.38■■■□□ 2.29
RC3H1Q5TC82 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.38■■■□□ 2.29
RC3H1Q5TC82 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RC3H1Q5TC82 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
RC3H1Q5TC82 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
RC3H1Q5TC82 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.37■■■□□ 2.29
RC3H1Q5TC82 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.37■■■□□ 2.29
RC3H1Q5TC82 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RC3H1Q5TC82 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
RC3H1Q5TC82 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 AC233992.3-201ENST00000607491 485 ntBASIC29.36■■■□□ 2.29
RC3H1Q5TC82 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
RC3H1Q5TC82 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RC3H1Q5TC82 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RC3H1Q5TC82 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
RC3H1Q5TC82 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RC3H1Q5TC82 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RC3H1Q5TC82 BX842568.3-201ENST00000418104 571 ntBASIC29.34■■■□□ 2.29
RC3H1Q5TC82 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.34■■■□□ 2.29
RC3H1Q5TC82 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RC3H1Q5TC82 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
RC3H1Q5TC82 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RC3H1Q5TC82 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RC3H1Q5TC82 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.33■■■□□ 2.29
RC3H1Q5TC82 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
RC3H1Q5TC82 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.32■■■□□ 2.28
RC3H1Q5TC82 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RC3H1Q5TC82 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.31■■■□□ 2.28
RC3H1Q5TC82 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RC3H1Q5TC82 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.3■■■□□ 2.28
RC3H1Q5TC82 AC006455.2-201ENST00000429931 906 ntBASIC29.3■■■□□ 2.28
RC3H1Q5TC82 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RC3H1Q5TC82 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RC3H1Q5TC82 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.3■■■□□ 2.28
RC3H1Q5TC82 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RC3H1Q5TC82 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RC3H1Q5TC82 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RC3H1Q5TC82 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms