Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CDCA8Q53HL2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.94■■■□□ 2.7
CDCA8Q53HL2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.94■■■□□ 2.7
CDCA8Q53HL2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDCA8Q53HL2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CDCA8Q53HL2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDCA8Q53HL2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDCA8Q53HL2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDCA8Q53HL2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDCA8Q53HL2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDCA8Q53HL2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 AC005703.6-201ENST00000623265 1329 ntBASIC31.91■■■□□ 2.7
CDCA8Q53HL2 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDCA8Q53HL2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.9■■■□□ 2.7
CDCA8Q53HL2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.9■■■□□ 2.7
CDCA8Q53HL2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.9■■■□□ 2.7
CDCA8Q53HL2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDCA8Q53HL2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.89■■■□□ 2.7
CDCA8Q53HL2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDCA8Q53HL2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.89■■■□□ 2.69
CDCA8Q53HL2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.89■■■□□ 2.69
CDCA8Q53HL2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.89■■■□□ 2.69
CDCA8Q53HL2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.89■■■□□ 2.69
CDCA8Q53HL2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.88■■■□□ 2.69
CDCA8Q53HL2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.88■■■□□ 2.69
CDCA8Q53HL2 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.88■■■□□ 2.69
CDCA8Q53HL2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.87■■■□□ 2.69
CDCA8Q53HL2 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.87■■■□□ 2.69
CDCA8Q53HL2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
CDCA8Q53HL2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CDCA8Q53HL2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CDCA8Q53HL2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CDCA8Q53HL2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.86■■■□□ 2.69
CDCA8Q53HL2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.86■■■□□ 2.69
CDCA8Q53HL2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDCA8Q53HL2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDCA8Q53HL2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDCA8Q53HL2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDCA8Q53HL2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDCA8Q53HL2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CDCA8Q53HL2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.85■■■□□ 2.69
CDCA8Q53HL2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDCA8Q53HL2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDCA8Q53HL2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
CDCA8Q53HL2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.83■■■□□ 2.69
CDCA8Q53HL2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CDCA8Q53HL2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.83■■■□□ 2.69
CDCA8Q53HL2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDCA8Q53HL2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.82■■■□□ 2.68
CDCA8Q53HL2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDCA8Q53HL2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDCA8Q53HL2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
CDCA8Q53HL2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDCA8Q53HL2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CDCA8Q53HL2 AC008406.3-201ENST00000620001 1374 ntBASIC31.81■■■□□ 2.68
CDCA8Q53HL2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDCA8Q53HL2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.8■■■□□ 2.68
CDCA8Q53HL2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDCA8Q53HL2 AC131281.2-201ENST00000520478 145 ntBASIC31.8■■■□□ 2.68
CDCA8Q53HL2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDCA8Q53HL2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDCA8Q53HL2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDCA8Q53HL2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CDCA8Q53HL2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CDCA8Q53HL2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CDCA8Q53HL2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CDCA8Q53HL2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CDCA8Q53HL2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms