Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCSMST1Q4G0I0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCSMST1Q4G0I0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCSMST1Q4G0I0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCSMST1Q4G0I0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.41■■□□□ 1.18
CCSMST1Q4G0I0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.4■■□□□ 1.18
CCSMST1Q4G0I0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.39■■□□□ 1.18
CCSMST1Q4G0I0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 ABCB10P4-201ENST00000566803 2184 ntBASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 AL022069.1-201ENST00000568025 1636 ntBASIC22.39■■□□□ 1.17
CCSMST1Q4G0I0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 Z92544.1-202ENST00000571933 1220 ntBASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSMST1Q4G0I0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCSMST1Q4G0I0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 MIR4787-201ENST00000607364 84 ntBASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCSMST1Q4G0I0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 KRT125P-201ENST00000546827 989 ntBASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 SNX5-217ENST00000606557 1087 ntBASIC22.35■■□□□ 1.17
CCSMST1Q4G0I0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.34■■□□□ 1.17
CCSMST1Q4G0I0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
CCSMST1Q4G0I0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCSMST1Q4G0I0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCSMST1Q4G0I0 AC004448.1-201ENST00000458332 883 ntBASIC22.34■■□□□ 1.17
CCSMST1Q4G0I0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCSMST1Q4G0I0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCSMST1Q4G0I0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCSMST1Q4G0I0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.33■■□□□ 1.16
CCSMST1Q4G0I0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 AC092028.1-203ENST00000608262 953 ntBASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CCSMST1Q4G0I0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCSMST1Q4G0I0 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.31■■□□□ 1.16
CCSMST1Q4G0I0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.31■■□□□ 1.16
CCSMST1Q4G0I0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCSMST1Q4G0I0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 AL161729.1-201ENST00000604104 1402 ntBASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.3■■□□□ 1.16
CCSMST1Q4G0I0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms