Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YOL107WYOL107W 1029 nt5.86□□□□□ -1.47
SSL2Q00578 ATG1YGL180W 2694 nt5.86□□□□□ -1.47
SSL2Q00578 ARB1YER036C 1833 nt5.85□□□□□ -1.47
SSL2Q00578 PRR1YKL116C 1557 nt5.85□□□□□ -1.47
SSL2Q00578 HES1YOR237W 1305 nt5.85□□□□□ -1.47
SSL2Q00578 OKP1YGR179C 1221 nt5.85□□□□□ -1.47
SSL2Q00578 RPR2YIR015W 435 nt5.85□□□□□ -1.47
SSL2Q00578 MPM1YJL066C 759 nt5.85□□□□□ -1.47
SSL2Q00578 YML057C-AYML057C-A 390 nt5.85□□□□□ -1.47
SSL2Q00578 PFA4YOL003C 1137 nt5.85□□□□□ -1.47
SSL2Q00578 GPM3YOL056W 912 nt5.85□□□□□ -1.47
SSL2Q00578 PMA1YGL008C 2757 nt5.84□□□□□ -1.47
SSL2Q00578 UGA1YGR019W 1416 nt5.84□□□□□ -1.47
SSL2Q00578 GUP2YPL189W 1830 nt5.84□□□□□ -1.47
SSL2Q00578 SRG1SRG1 551 nt5.84□□□□□ -1.47
SSL2Q00578 NCE103YNL036W 666 nt5.84□□□□□ -1.47
SSL2Q00578 SED4YCR067C 3198 nt5.84□□□□□ -1.47
SSL2Q00578 VBA1YMR088C 1689 nt5.84□□□□□ -1.47
SSL2Q00578 PMT2YAL023C 2280 nt5.83□□□□□ -1.48
SSL2Q00578 UTR4YEL038W 684 nt5.83□□□□□ -1.48
SSL2Q00578 RML2YEL050C 1182 nt5.83□□□□□ -1.48
SSL2Q00578 MRPL25YGR076C 474 nt5.83□□□□□ -1.48
SSL2Q00578 MRP13YGR084C 1020 nt5.83□□□□□ -1.48
SSL2Q00578 KTI12YKL110C 942 nt5.83□□□□□ -1.48
SSL2Q00578 YNL108CYNL108C 813 nt5.83□□□□□ -1.48
SSL2Q00578 YOL050CYOL050C 321 nt5.83□□□□□ -1.48
SSL2Q00578 YOR020W-AYOR020W-A 273 nt5.83□□□□□ -1.48
SSL2Q00578 ATG32YIL146C 1590 nt5.83□□□□□ -1.48
SSL2Q00578 PHO90YJL198W 2646 nt5.83□□□□□ -1.48
SSL2Q00578 GCV1YDR019C 1203 nt5.82□□□□□ -1.48
SSL2Q00578 YHL045WYHL045W 348 nt5.82□□□□□ -1.48
SSL2Q00578 YHR127WYHR127W 732 nt5.82□□□□□ -1.48
SSL2Q00578 YLL017WYLL017W 312 nt5.82□□□□□ -1.48
SSL2Q00578 TFS1YLR178C 660 nt5.82□□□□□ -1.48
SSL2Q00578 RSF1YMR030W 1131 nt5.82□□□□□ -1.48
SSL2Q00578 SEC17YBL050W 879 nt5.82□□□□□ -1.48
SSL2Q00578 DCC1YCL016C 1143 nt5.82□□□□□ -1.48
SSL2Q00578 YEF1YEL041W 1488 nt5.82□□□□□ -1.48
SSL2Q00578 CCZ1YBR131W 2115 nt5.81□□□□□ -1.48
SSL2Q00578 TCA17YEL048C 459 nt5.81□□□□□ -1.48
SSL2Q00578 SCP1YOR367W 603 nt5.81□□□□□ -1.48
SSL2Q00578 GPI2YPL076W 843 nt5.81□□□□□ -1.48
SSL2Q00578 PUS1YPL212C 1635 nt5.81□□□□□ -1.48
SSL2Q00578 RBA50YDR527W 1320 nt5.8□□□□□ -1.48
SSL2Q00578 CDC19YAL038W 1503 nt5.8□□□□□ -1.48
SSL2Q00578 BRE2YLR015W 1518 nt5.8□□□□□ -1.48
SSL2Q00578 ADE4YMR300C 1533 nt5.8□□□□□ -1.48
SSL2Q00578 GAL10YBR019C 2100 nt5.8□□□□□ -1.48
SSL2Q00578 UPS3YDR185C 540 nt5.8□□□□□ -1.48
SSL2Q00578 BUD16YEL029C 939 nt5.8□□□□□ -1.48
SSL2Q00578 MFA2YNL145W 117 nt5.8□□□□□ -1.48
SSL2Q00578 YDC1YPL087W 954 nt5.8□□□□□ -1.48
SSL2Q00578 COX11YPL132W 903 nt5.8□□□□□ -1.48
SSL2Q00578 GRS1YBR121C 2004 nt5.8□□□□□ -1.48
SSL2Q00578 TPS3YMR261C 3165 nt5.79□□□□□ -1.48
SSL2Q00578 TAH18YPR048W 1872 nt5.79□□□□□ -1.48
SSL2Q00578 KAR1YNL188W 1302 nt5.79□□□□□ -1.48
SSL2Q00578 YGR176WYGR176W 348 nt5.79□□□□□ -1.48
SSL2Q00578 YLR194CYLR194C 765 nt5.79□□□□□ -1.48
SSL2Q00578 DCP1YOL149W 696 nt5.79□□□□□ -1.48
SSL2Q00578 MED4YOR174W 855 nt5.79□□□□□ -1.48
SSL2Q00578 NPT1YOR209C 1290 nt5.79□□□□□ -1.48
SSL2Q00578 BTS1YPL069C 1008 nt5.79□□□□□ -1.48
SSL2Q00578 UBP9YER098W 2265 nt5.79□□□□□ -1.48
SSL2Q00578 TUL1YKL034W 2277 nt5.79□□□□□ -1.48
SSL2Q00578 RTT106YNL206C 1368 nt5.79□□□□□ -1.48
SSL2Q00578 MGR3YMR115W 1506 nt5.79□□□□□ -1.48
SSL2Q00578 SPC97YHR172W 2472 nt5.79□□□□□ -1.48
SSL2Q00578 RSC6YCR052W 1452 nt5.78□□□□□ -1.48
SSL2Q00578 PHM8YER037W 966 nt5.78□□□□□ -1.48
SSL2Q00578 DUO1YGL061C 744 nt5.78□□□□□ -1.48
SSL2Q00578 MTG1YMR097C 1104 nt5.78□□□□□ -1.48
SSL2Q00578 YNL303WYNL303W 348 nt5.78□□□□□ -1.48
SSL2Q00578 IRC14YOR135C 342 nt5.78□□□□□ -1.48
SSL2Q00578 PRM4YPL156C 855 nt5.78□□□□□ -1.48
SSL2Q00578 SNT2YGL131C 4212 nt5.78□□□□□ -1.48
SSL2Q00578 MIF2YKL089W 1650 nt5.78□□□□□ -1.48
SSL2Q00578 PAL1YDR348C 1500 nt5.78□□□□□ -1.48
SSL2Q00578 ELP2YGR200C 2367 nt5.78□□□□□ -1.48
SSL2Q00578 NSI1YDR026C 1713 nt5.77□□□□□ -1.49
SSL2Q00578 DIN7YDR263C 1293 nt5.77□□□□□ -1.49
SSL2Q00578 ERD1YDR414C 1089 nt5.77□□□□□ -1.49
SSL2Q00578 YPT32YGL210W 669 nt5.77□□□□□ -1.49
SSL2Q00578 ADH4YGL256W 1149 nt5.77□□□□□ -1.49
SSL2Q00578 NAG1YGR031C-A 492 nt5.77□□□□□ -1.49
SSL2Q00578 DAL82YNL314W 768 nt5.77□□□□□ -1.49
SSL2Q00578 OSW1YOR255W 837 nt5.77□□□□□ -1.49
SSL2Q00578 PRT1YOR361C 2292 nt5.77□□□□□ -1.49
SSL2Q00578 PDI1YCL043C 1569 nt5.76□□□□□ -1.49
SSL2Q00578 NFI1YOR156C 2181 nt5.76□□□□□ -1.49
SSL2Q00578 YDL119CYDL119C 924 nt5.76□□□□□ -1.49
SSL2Q00578 HAT2YEL056W 1206 nt5.76□□□□□ -1.49
SSL2Q00578 SEH1YGL100W 1050 nt5.76□□□□□ -1.49
SSL2Q00578 YGL101WYGL101W 648 nt5.76□□□□□ -1.49
SSL2Q00578 YLF2YHL014C 1218 nt5.76□□□□□ -1.49
SSL2Q00578 RRT7YLL030C 342 nt5.76□□□□□ -1.49
SSL2Q00578 LIP2YLR239C 987 nt5.76□□□□□ -1.49
SSL2Q00578 YIP3YNL044W 531 nt5.76□□□□□ -1.49
SSL2Q00578 YBR089WYBR089W 600 nt5.76□□□□□ -1.49
SSL2Q00578 STE7YDL159W 1548 nt5.75□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms