Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VAMP2P63027 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.82■□□□□ 0.6
VAMP2P63027 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAMP2P63027 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAMP2P63027 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAMP2P63027 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAMP2P63027 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.81■□□□□ 0.6
VAMP2P63027 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
VAMP2P63027 HLA-L-211ENST00000482052 1765 ntBASIC18.81■□□□□ 0.6
VAMP2P63027 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.81■□□□□ 0.6
VAMP2P63027 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAMP2P63027 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.81■□□□□ 0.6
VAMP2P63027 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
VAMP2P63027 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
VAMP2P63027 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
VAMP2P63027 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.8■□□□□ 0.6
VAMP2P63027 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
VAMP2P63027 AC233723.2-201ENST00000623798 2106 ntBASIC18.8■□□□□ 0.6
VAMP2P63027 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.8■□□□□ 0.6
VAMP2P63027 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAMP2P63027 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VAMP2P63027 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
VAMP2P63027 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.79■□□□□ 0.6
VAMP2P63027 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.79■□□□□ 0.6
VAMP2P63027 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAMP2P63027 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAMP2P63027 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAMP2P63027 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAMP2P63027 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAMP2P63027 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.78■□□□□ 0.6
VAMP2P63027 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.78■□□□□ 0.6
VAMP2P63027 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.78■□□□□ 0.6
VAMP2P63027 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.78■□□□□ 0.6
VAMP2P63027 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAMP2P63027 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.78■□□□□ 0.6
VAMP2P63027 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VAMP2P63027 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAMP2P63027 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VAMP2P63027 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAMP2P63027 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.77■□□□□ 0.6
VAMP2P63027 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAMP2P63027 HLA-V-202ENST00000446817 847 ntBASIC18.77■□□□□ 0.6
VAMP2P63027 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VAMP2P63027 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAMP2P63027 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VAMP2P63027 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAMP2P63027 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VAMP2P63027 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAMP2P63027 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAMP2P63027 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAMP2P63027 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
VAMP2P63027 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VAMP2P63027 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.76■□□□□ 0.59
VAMP2P63027 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VAMP2P63027 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAMP2P63027 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VAMP2P63027 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.75■□□□□ 0.59
VAMP2P63027 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VAMP2P63027 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.75■□□□□ 0.59
VAMP2P63027 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.75■□□□□ 0.59
VAMP2P63027 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAMP2P63027 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.75■□□□□ 0.59
VAMP2P63027 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VAMP2P63027 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.74■□□□□ 0.59
VAMP2P63027 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.74■□□□□ 0.59
VAMP2P63027 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.74■□□□□ 0.59
VAMP2P63027 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VAMP2P63027 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAMP2P63027 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VAMP2P63027 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms