Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 MIR6089-201ENST00000616698 64 ntBASIC20.7■□□□□ 0.9
LSM3P62310 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LSM3P62310 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LSM3P62310 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM3P62310 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LSM3P62310 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.69■□□□□ 0.9
LSM3P62310 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.69■□□□□ 0.9
LSM3P62310 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM3P62310 DUX4L28-201ENST00000623687 678 ntBASIC20.69■□□□□ 0.9
LSM3P62310 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM3P62310 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM3P62310 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM3P62310 SLC25A24-204ENST00000569674 2357 ntBASIC20.68■□□□□ 0.9
LSM3P62310 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LSM3P62310 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM3P62310 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.68■□□□□ 0.9
LSM3P62310 AC127496.7-201ENST00000625110 1798 ntBASIC20.68■□□□□ 0.9
LSM3P62310 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM3P62310 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LSM3P62310 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LSM3P62310 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LSM3P62310 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM3P62310 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM3P62310 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM3P62310 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
LSM3P62310 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM3P62310 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM3P62310 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LSM3P62310 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LSM3P62310 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
LSM3P62310 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
LSM3P62310 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM3P62310 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM3P62310 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM3P62310 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM3P62310 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LSM3P62310 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM3P62310 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSM3P62310 AL359258.2-201ENST00000564063 1566 ntBASIC20.65■□□□□ 0.9
LSM3P62310 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSM3P62310 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
LSM3P62310 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LSM3P62310 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSM3P62310 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSM3P62310 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.64■□□□□ 0.89
LSM3P62310 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.64■□□□□ 0.89
LSM3P62310 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM3P62310 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM3P62310 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
LSM3P62310 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.64■□□□□ 0.89
LSM3P62310 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
LSM3P62310 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LSM3P62310 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
LSM3P62310 FOXO3B-201ENST00000395675 1928 ntBASIC20.63■□□□□ 0.89
LSM3P62310 ANOS2P-203ENST00000472227 1816 ntBASIC20.63■□□□□ 0.89
LSM3P62310 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM3P62310 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.63■□□□□ 0.89
LSM3P62310 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LSM3P62310 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM3P62310 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LSM3P62310 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM3P62310 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM3P62310 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM3P62310 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM3P62310 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM3P62310 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM3P62310 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LSM3P62310 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSM3P62310 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM3P62310 ECEL1P1-201ENST00000373592 1742 ntBASIC20.61■□□□□ 0.89
LSM3P62310 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LSM3P62310 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM3P62310 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM3P62310 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.6■□□□□ 0.89
LSM3P62310 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSM3P62310 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM3P62310 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSM3P62310 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms