Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SPCS3P61009 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPCS3P61009 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.58■□□□□ 0.57
SPCS3P61009 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPCS3P61009 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPCS3P61009 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPCS3P61009 MIR7108-201ENST00000614319 87 ntBASIC18.58■□□□□ 0.56
SPCS3P61009 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPCS3P61009 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SPCS3P61009 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.57■□□□□ 0.56
SPCS3P61009 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.57■□□□□ 0.56
SPCS3P61009 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.57■□□□□ 0.56
SPCS3P61009 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS3P61009 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.56■□□□□ 0.56
SPCS3P61009 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPCS3P61009 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPCS3P61009 AC026202.3-201ENST00000600805 1127 ntBASIC18.56■□□□□ 0.56
SPCS3P61009 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SPCS3P61009 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPCS3P61009 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SPCS3P61009 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SPCS3P61009 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SPCS3P61009 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.55■□□□□ 0.56
SPCS3P61009 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SPCS3P61009 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SPCS3P61009 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS3P61009 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS3P61009 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS3P61009 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SPCS3P61009 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS3P61009 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS3P61009 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS3P61009 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS3P61009 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.54■□□□□ 0.56
SPCS3P61009 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.54■□□□□ 0.56
SPCS3P61009 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS3P61009 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPCS3P61009 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SPCS3P61009 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPCS3P61009 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPCS3P61009 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPCS3P61009 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.52■□□□□ 0.56
SPCS3P61009 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPCS3P61009 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPCS3P61009 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPCS3P61009 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPCS3P61009 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.51■□□□□ 0.55
SPCS3P61009 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
SPCS3P61009 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
SPCS3P61009 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
SPCS3P61009 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.51■□□□□ 0.55
SPCS3P61009 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.51■□□□□ 0.55
SPCS3P61009 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.51■□□□□ 0.55
SPCS3P61009 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SPCS3P61009 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS3P61009 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
SPCS3P61009 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.5■□□□□ 0.55
SPCS3P61009 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.5■□□□□ 0.55
SPCS3P61009 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SPCS3P61009 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.5■□□□□ 0.55
SPCS3P61009 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS3P61009 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms