Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
RIPK4P57078 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RIPK4P57078 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.27■■■□□ 2.44
RIPK4P57078 MIR6722-201ENST00000617286 78 ntBASIC30.27■■■□□ 2.44
RIPK4P57078 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.27■■■□□ 2.44
RIPK4P57078 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.27■■■□□ 2.44
RIPK4P57078 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
RIPK4P57078 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RIPK4P57078 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.26■■■□□ 2.44
RIPK4P57078 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
RIPK4P57078 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.26■■■□□ 2.44
RIPK4P57078 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RIPK4P57078 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RIPK4P57078 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.26■■■□□ 2.43
RIPK4P57078 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
RIPK4P57078 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
RIPK4P57078 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.26■■■□□ 2.43
RIPK4P57078 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.26■■■□□ 2.43
RIPK4P57078 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RIPK4P57078 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.25■■■□□ 2.43
RIPK4P57078 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.25■■■□□ 2.43
RIPK4P57078 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.25■■■□□ 2.43
RIPK4P57078 AC131212.1-201ENST00000613771 668 ntBASIC30.25■■■□□ 2.43
RIPK4P57078 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
RIPK4P57078 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RIPK4P57078 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.25■■■□□ 2.43
RIPK4P57078 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RIPK4P57078 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
RIPK4P57078 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIPK4P57078 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
RIPK4P57078 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIPK4P57078 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
RIPK4P57078 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIPK4P57078 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.24■■■□□ 2.43
RIPK4P57078 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
RIPK4P57078 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.23■■■□□ 2.43
RIPK4P57078 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.23■■■□□ 2.43
RIPK4P57078 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.23■■■□□ 2.43
RIPK4P57078 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIPK4P57078 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.23■■■□□ 2.43
RIPK4P57078 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIPK4P57078 AL139125.2-201ENST00000623134 1869 ntBASIC30.23■■■□□ 2.43
RIPK4P57078 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RIPK4P57078 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RIPK4P57078 MIR6724-1-201ENST00000616420 92 ntBASIC30.22■■■□□ 2.43
RIPK4P57078 MIR6724-2-201ENST00000616483 92 ntBASIC30.22■■■□□ 2.43
RIPK4P57078 MIR6724-4-201ENST00000617390 92 ntBASIC30.22■■■□□ 2.43
RIPK4P57078 MIR6724-3-201ENST00000622482 92 ntBASIC30.22■■■□□ 2.43
RIPK4P57078 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.22■■■□□ 2.43
RIPK4P57078 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.22■■■□□ 2.43
RIPK4P57078 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RIPK4P57078 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
RIPK4P57078 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.21■■■□□ 2.43
RIPK4P57078 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RIPK4P57078 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
RIPK4P57078 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.21■■■□□ 2.43
RIPK4P57078 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIPK4P57078 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIPK4P57078 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIPK4P57078 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIPK4P57078 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIPK4P57078 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RIPK4P57078 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RIPK4P57078 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RIPK4P57078 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RIPK4P57078 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.18■■■□□ 2.42
RIPK4P57078 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIPK4P57078 LINC01124-201ENST00000409786 2117 ntBASIC30.17■■■□□ 2.42
RIPK4P57078 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
RIPK4P57078 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RIPK4P57078 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RIPK4P57078 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.17■■■□□ 2.42
RIPK4P57078 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RIPK4P57078 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
RIPK4P57078 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RIPK4P57078 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIPK4P57078 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIPK4P57078 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIPK4P57078 AL161729.1-201ENST00000604104 1402 ntBASIC30.15■■■□□ 2.42
RIPK4P57078 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RIPK4P57078 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
RIPK4P57078 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIPK4P57078 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.15■■■□□ 2.42
RIPK4P57078 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.15■■■□□ 2.42
RIPK4P57078 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.15■■■□□ 2.42
RIPK4P57078 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.15■■■□□ 2.42
RIPK4P57078 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RIPK4P57078 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIPK4P57078 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIPK4P57078 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.15■■■□□ 2.42
RIPK4P57078 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RIPK4P57078 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.14■■■□□ 2.42
RIPK4P57078 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RIPK4P57078 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.14■■■□□ 2.42
RIPK4P57078 AL117332.1-201ENST00000622628 974 ntBASIC30.14■■■□□ 2.42
RIPK4P57078 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.14■■■□□ 2.41
RIPK4P57078 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
RIPK4P57078 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
RIPK4P57078 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.13■■■□□ 2.41
RIPK4P57078 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.13■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms