Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.18■■□□□ 1.14
CLDN6P56747 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN6P56747 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.18■■□□□ 1.14
CLDN6P56747 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CLDN6P56747 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CLDN6P56747 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN6P56747 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN6P56747 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN6P56747 RASA4CP-201ENST00000424092 1398 ntBASIC22.17■■□□□ 1.14
CLDN6P56747 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.17■■□□□ 1.14
CLDN6P56747 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN6P56747 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.17■■□□□ 1.14
CLDN6P56747 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.17■■□□□ 1.14
CLDN6P56747 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN6P56747 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN6P56747 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN6P56747 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.16■■□□□ 1.14
CLDN6P56747 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
CLDN6P56747 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN6P56747 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.15■■□□□ 1.14
CLDN6P56747 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.15■■□□□ 1.14
CLDN6P56747 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CLDN6P56747 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.15■■□□□ 1.14
CLDN6P56747 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN6P56747 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN6P56747 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.15■■□□□ 1.14
CLDN6P56747 AC099791.1-201ENST00000416440 715 ntBASIC22.15■■□□□ 1.14
CLDN6P56747 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.15■■□□□ 1.14
CLDN6P56747 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN6P56747 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLDN6P56747 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.14■■□□□ 1.14
CLDN6P56747 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.14■■□□□ 1.13
CLDN6P56747 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CLDN6P56747 AC027682.1-201ENST00000562846 899 ntBASIC22.14■■□□□ 1.13
CLDN6P56747 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.14■■□□□ 1.13
CLDN6P56747 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN6P56747 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN6P56747 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN6P56747 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN6P56747 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN6P56747 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN6P56747 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN6P56747 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.13■■□□□ 1.13
CLDN6P56747 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.13■■□□□ 1.13
CLDN6P56747 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN6P56747 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.13■■□□□ 1.13
CLDN6P56747 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN6P56747 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CLDN6P56747 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CLDN6P56747 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 IRS3P-201ENST00000223076 1006 ntBASIC22.12■■□□□ 1.13
CLDN6P56747 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.12■■□□□ 1.13
CLDN6P56747 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.12■■□□□ 1.13
CLDN6P56747 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.12■■□□□ 1.13
CLDN6P56747 IKBKGP1-201ENST00000612193 1073 ntBASIC22.12■■□□□ 1.13
CLDN6P56747 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN6P56747 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CLDN6P56747 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.12■■□□□ 1.13
CLDN6P56747 AC131274.2-201ENST00000580697 1507 ntBASIC22.11■■□□□ 1.13
CLDN6P56747 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.11■■□□□ 1.13
CLDN6P56747 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.11■■□□□ 1.13
CLDN6P56747 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.11■■□□□ 1.13
CLDN6P56747 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.11■■□□□ 1.13
CLDN6P56747 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN6P56747 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CLDN6P56747 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN6P56747 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN6P56747 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CLDN6P56747 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN6P56747 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN6P56747 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN6P56747 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.1■■□□□ 1.13
CLDN6P56747 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.09■■□□□ 1.13
CLDN6P56747 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 AC006455.2-201ENST00000429931 906 ntBASIC22.09■■□□□ 1.13
CLDN6P56747 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.09■■□□□ 1.13
CLDN6P56747 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.09■■□□□ 1.13
CLDN6P56747 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms