Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUBP1P53384 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.22■■□□□ 1.31
NUBP1P53384 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
NUBP1P53384 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.22■■□□□ 1.31
NUBP1P53384 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.22■■□□□ 1.31
NUBP1P53384 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUBP1P53384 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUBP1P53384 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NUBP1P53384 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NUBP1P53384 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.21■■□□□ 1.31
NUBP1P53384 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.21■■□□□ 1.31
NUBP1P53384 CCDC92B-201ENST00000575506 885 ntBASIC23.21■■□□□ 1.31
NUBP1P53384 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NUBP1P53384 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.21■■□□□ 1.31
NUBP1P53384 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NUBP1P53384 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NUBP1P53384 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NUBP1P53384 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUBP1P53384 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.2■■□□□ 1.3
NUBP1P53384 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NUBP1P53384 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUBP1P53384 TSPY26P-201ENST00000476365 1326 ntBASIC23.2■■□□□ 1.3
NUBP1P53384 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.2■■□□□ 1.3
NUBP1P53384 AC080038.1-201ENST00000611274 1154 ntBASIC23.2■■□□□ 1.3
NUBP1P53384 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.2■■□□□ 1.3
NUBP1P53384 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUBP1P53384 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUBP1P53384 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NUBP1P53384 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.19■■□□□ 1.3
NUBP1P53384 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUBP1P53384 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.19■■□□□ 1.3
NUBP1P53384 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.19■■□□□ 1.3
NUBP1P53384 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUBP1P53384 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NUBP1P53384 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUBP1P53384 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
NUBP1P53384 MIR572-201ENST00000384983 95 ntBASIC23.18■■□□□ 1.3
NUBP1P53384 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUBP1P53384 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.18■■□□□ 1.3
NUBP1P53384 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
NUBP1P53384 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.18■■□□□ 1.3
NUBP1P53384 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.18■■□□□ 1.3
NUBP1P53384 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
NUBP1P53384 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUBP1P53384 AC009102.2-201ENST00000606772 1639 ntBASIC23.18■■□□□ 1.3
NUBP1P53384 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUBP1P53384 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NUBP1P53384 C17orf82-201ENST00000623772 1530 ntBASIC23.18■■□□□ 1.3
NUBP1P53384 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUBP1P53384 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
NUBP1P53384 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NUBP1P53384 KRT18P14-201ENST00000534205 1250 ntBASIC23.17■■□□□ 1.3
NUBP1P53384 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUBP1P53384 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
NUBP1P53384 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUBP1P53384 AC012414.1-201ENST00000556676 535 ntBASIC23.16■■□□□ 1.3
NUBP1P53384 MIR3181-201ENST00000578512 73 ntBASIC23.16■■□□□ 1.3
NUBP1P53384 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.16■■□□□ 1.3
NUBP1P53384 TERF1P2-201ENST00000583350 1212 ntBASIC23.16■■□□□ 1.3
NUBP1P53384 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUBP1P53384 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUBP1P53384 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.16■■□□□ 1.3
NUBP1P53384 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.15■■□□□ 1.3
NUBP1P53384 LINC02228-203ENST00000641970 1355 ntBASIC23.15■■□□□ 1.3
NUBP1P53384 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUBP1P53384 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUBP1P53384 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NUBP1P53384 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NUBP1P53384 RAP2CP1-201ENST00000605103 478 ntBASIC23.15■■□□□ 1.3
NUBP1P53384 AC066615.1-201ENST00000640911 628 ntBASIC23.15■■□□□ 1.3
NUBP1P53384 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.15■■□□□ 1.3
NUBP1P53384 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NUBP1P53384 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.15■■□□□ 1.3
NUBP1P53384 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.15■■□□□ 1.3
NUBP1P53384 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUBP1P53384 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.14■■□□□ 1.29
NUBP1P53384 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.14■■□□□ 1.29
NUBP1P53384 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NUBP1P53384 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
NUBP1P53384 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUBP1P53384 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NUBP1P53384 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.13■■□□□ 1.29
NUBP1P53384 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.13■■□□□ 1.29
NUBP1P53384 AC120057.1-201ENST00000483947 663 ntBASIC23.13■■□□□ 1.29
NUBP1P53384 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NUBP1P53384 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NUBP1P53384 AC244517.3-201ENST00000616254 1235 ntBASIC23.13■■□□□ 1.29
NUBP1P53384 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
NUBP1P53384 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NUBP1P53384 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
NUBP1P53384 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
NUBP1P53384 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.12■■□□□ 1.29
NUBP1P53384 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NUBP1P53384 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NUBP1P53384 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NUBP1P53384 AC006015.1-201ENST00000429970 570 ntBASIC23.12■■□□□ 1.29
NUBP1P53384 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NUBP1P53384 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.12■■□□□ 1.29
NUBP1P53384 AC104771.1-201ENST00000603335 964 ntBASIC23.12■■□□□ 1.29
NUBP1P53384 AL589935.2-201ENST00000616471 1231 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms