Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.6■■□□□ 1.21
CLCNKAP51800 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCNKAP51800 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.59■■□□□ 1.21
CLCNKAP51800 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.59■■□□□ 1.21
CLCNKAP51800 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.59■■□□□ 1.21
CLCNKAP51800 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCNKAP51800 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCNKAP51800 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.58■■□□□ 1.21
CLCNKAP51800 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.58■■□□□ 1.21
CLCNKAP51800 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.58■■□□□ 1.21
CLCNKAP51800 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.58■■□□□ 1.21
CLCNKAP51800 MIR3621-201ENST00000580529 85 ntBASIC22.58■■□□□ 1.21
CLCNKAP51800 AL161729.1-201ENST00000604104 1402 ntBASIC22.57■■□□□ 1.2
CLCNKAP51800 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCNKAP51800 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCNKAP51800 AL117332.1-201ENST00000622628 974 ntBASIC22.57■■□□□ 1.2
CLCNKAP51800 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLCNKAP51800 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCNKAP51800 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCNKAP51800 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCNKAP51800 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCNKAP51800 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCNKAP51800 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCNKAP51800 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCNKAP51800 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCNKAP51800 AL022069.1-201ENST00000568025 1636 ntBASIC22.56■■□□□ 1.2
CLCNKAP51800 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.55■■□□□ 1.2
CLCNKAP51800 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCNKAP51800 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCNKAP51800 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCNKAP51800 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCNKAP51800 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.55■■□□□ 1.2
CLCNKAP51800 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCNKAP51800 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.55■■□□□ 1.2
CLCNKAP51800 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.55■■□□□ 1.2
CLCNKAP51800 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCNKAP51800 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCNKAP51800 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLCNKAP51800 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLCNKAP51800 AL356740.2-201ENST00000601559 647 ntBASIC22.54■■□□□ 1.2
CLCNKAP51800 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCNKAP51800 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCNKAP51800 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLCNKAP51800 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCNKAP51800 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CLCNKAP51800 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLCNKAP51800 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.53■■□□□ 1.2
CLCNKAP51800 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCNKAP51800 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
CLCNKAP51800 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCNKAP51800 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCNKAP51800 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CLCNKAP51800 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLCNKAP51800 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCNKAP51800 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCNKAP51800 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CLCNKAP51800 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCNKAP51800 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.52■■□□□ 1.2
CLCNKAP51800 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CLCNKAP51800 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCNKAP51800 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CLCNKAP51800 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.52■■□□□ 1.2
CLCNKAP51800 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CLCNKAP51800 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CLCNKAP51800 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCNKAP51800 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCNKAP51800 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLCNKAP51800 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCNKAP51800 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLCNKAP51800 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.5■■□□□ 1.19
CLCNKAP51800 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCNKAP51800 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.5■■□□□ 1.19
CLCNKAP51800 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCNKAP51800 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCNKAP51800 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCNKAP51800 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLCNKAP51800 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CLCNKAP51800 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCNKAP51800 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CLCNKAP51800 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCNKAP51800 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCNKAP51800 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCNKAP51800 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.49■■□□□ 1.19
CLCNKAP51800 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCNKAP51800 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLCNKAP51800 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCNKAP51800 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCNKAP51800 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
CLCNKAP51800 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCNKAP51800 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCNKAP51800 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.48■■□□□ 1.19
CLCNKAP51800 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.48■■□□□ 1.19
CLCNKAP51800 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CLCNKAP51800 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCNKAP51800 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.47■■□□□ 1.19
CLCNKAP51800 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCNKAP51800 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCNKAP51800 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCNKAP51800 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCNKAP51800 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms