Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFX2P48378 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 AC008813.1-201ENST00000536597 885 ntBASIC19.97■□□□□ 0.79
RFX2P48378 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX2P48378 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX2P48378 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
RFX2P48378 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX2P48378 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX2P48378 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX2P48378 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX2P48378 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX2P48378 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 AL121603.2-201ENST00000557373 2117 ntBASIC19.96■□□□□ 0.79
RFX2P48378 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX2P48378 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.95■□□□□ 0.78
RFX2P48378 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX2P48378 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX2P48378 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX2P48378 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX2P48378 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX2P48378 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RFX2P48378 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX2P48378 AC148477.6-201ENST00000623746 465 ntBASIC19.95■□□□□ 0.78
RFX2P48378 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX2P48378 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFX2P48378 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX2P48378 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX2P48378 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFX2P48378 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX2P48378 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX2P48378 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX2P48378 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RFX2P48378 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX2P48378 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX2P48378 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX2P48378 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX2P48378 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX2P48378 MIR6089-201ENST00000616698 64 ntBASIC19.92■□□□□ 0.78
RFX2P48378 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RFX2P48378 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX2P48378 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX2P48378 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX2P48378 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RFX2P48378 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX2P48378 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX2P48378 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX2P48378 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L13-201ENST00000554103 1267 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L15-201ENST00000611059 1267 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L23-201ENST00000615195 1269 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L24-201ENST00000617576 1269 ntBASIC19.91■□□□□ 0.78
RFX2P48378 LINC01971-201ENST00000617888 1048 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L22-201ENST00000618238 1269 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L20-201ENST00000619712 1269 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L21-201ENST00000622058 1269 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L10-201ENST00000622460 1267 ntBASIC19.91■□□□□ 0.78
RFX2P48378 DUX4L25-201ENST00000624915 1269 ntBASIC19.91■□□□□ 0.78
RFX2P48378 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX2P48378 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX2P48378 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX2P48378 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX2P48378 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 ANOS2P-203ENST00000472227 1816 ntBASIC19.9■□□□□ 0.78
RFX2P48378 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.9■□□□□ 0.78
RFX2P48378 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX2P48378 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX2P48378 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.89■□□□□ 0.77
RFX2P48378 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX2P48378 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms