Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	PLB2	YMR006C	2121 nt		5.56	□□□□□ -1.52
CAF16	P43569	MKK2	YPL140C	1521 nt		5.55	□□□□□ -1.52
CAF16	P43569	MRPS28	YDR337W	861 nt		5.55	□□□□□ -1.52
CAF16	P43569	COA1	YIL157C	594 nt		5.55	□□□□□ -1.52
CAF16	P43569	YLR118C	YLR118C	684 nt		5.55	□□□□□ -1.52
CAF16	P43569	YBL029C-A	YBL029C-A	285 nt		5.55	□□□□□ -1.52
CAF16	P43569	RKI1	YOR095C	777 nt		5.55	□□□□□ -1.52
CAF16	P43569	ERG10	YPL028W	1197 nt		5.55	□□□□□ -1.52
CAF16	P43569	MRP51	YPL118W	1035 nt		5.55	□□□□□ -1.52
CAF16	P43569	YMD8	YML038C	1329 nt		5.54	□□□□□ -1.52
CAF16	P43569	ASA1	YPR085C	1332 nt		5.54	□□□□□ -1.52
CAF16	P43569	ACT1	YFL039C	1128 nt		5.54	□□□□□ -1.52
CAF16	P43569	MRPS35	YGR165W	1038 nt		5.54	□□□□□ -1.52
CAF16	P43569	YJL047C-A	YJL047C-A	135 nt		5.54	□□□□□ -1.52
CAF16	P43569	NPA3	YJR072C	1158 nt		5.54	□□□□□ -1.52
CAF16	P43569	NSE1	YLR007W	1011 nt		5.54	□□□□□ -1.52
CAF16	P43569	YLR042C	YLR042C	486 nt		5.54	□□□□□ -1.52
CAF16	P43569	PRE5	YMR314W	705 nt		5.54	□□□□□ -1.52
CAF16	P43569	CPR8	YNR028W	927 nt		5.54	□□□□□ -1.52
CAF16	P43569	COQ3	YOL096C	939 nt		5.54	□□□□□ -1.52
CAF16	P43569	YOR062C	YOR062C	807 nt		5.54	□□□□□ -1.52
CAF16	P43569	SCO1	YBR037C	888 nt		5.54	□□□□□ -1.52
CAF16	P43569	YPR123C	YPR123C	435 nt		5.54	□□□□□ -1.52
CAF16	P43569	TNA1	YGR260W	1605 nt		5.54	□□□□□ -1.52
CAF16	P43569	VMA13	YPR036W	1437 nt		5.54	□□□□□ -1.52
CAF16	P43569	PDR18	YNR070W	4002 nt		5.53	□□□□□ -1.52
CAF16	P43569	VPS4	YPR173C	1314 nt		5.53	□□□□□ -1.52
CAF16	P43569	SEO1	YAL067C	1782 nt		5.53	□□□□□ -1.52
CAF16	P43569	AAP1	YHR047C	2571 nt		5.53	□□□□□ -1.52
CAF16	P43569	YHR054C	YHR054C	1065 nt		5.53	□□□□□ -1.52
CAF16	P43569	ALB1	YJL122W	528 nt		5.53	□□□□□ -1.52
CAF16	P43569	VPS24	YKL041W	675 nt		5.53	□□□□□ -1.52
CAF16	P43569	RHO4	YKR055W	876 nt		5.53	□□□□□ -1.52
CAF16	P43569	ORM2	YLR350W	651 nt		5.53	□□□□□ -1.52
CAF16	P43569	RPS10B	YMR230W	318 nt		5.53	□□□□□ -1.52
CAF16	P43569	THI80	YOR143C	960 nt		5.53	□□□□□ -1.52
CAF16	P43569	YBR196C-B	YBR196C-B	105 nt		5.53	□□□□□ -1.52
CAF16	P43569	MFG1	YDL233W	1377 nt		5.53	□□□□□ -1.52
CAF16	P43569	FUM1	YPL262W	1467 nt		5.52	□□□□□ -1.53
CAF16	P43569	YDR034C-C	YDR034C-C	1317 nt		5.52	□□□□□ -1.53
CAF16	P43569	YLR410W-A	YLR410W-A	1317 nt		5.52	□□□□□ -1.53
CAF16	P43569	FLC3	YGL139W	2409 nt		5.52	□□□□□ -1.53
CAF16	P43569	CLB1	YGR108W	1416 nt		5.52	□□□□□ -1.53
CAF16	P43569	MSS2	YDL107W	1056 nt		5.52	□□□□□ -1.53
CAF16	P43569	SDT1	YGL224C	843 nt		5.52	□□□□□ -1.53
CAF16	P43569	KAE1	YKR038C	1161 nt		5.52	□□□□□ -1.53
CAF16	P43569	OSW1	YOR255W	837 nt		5.52	□□□□□ -1.53
CAF16	P43569	RMI1	YPL024W	726 nt		5.52	□□□□□ -1.53
CAF16	P43569	MPH2	YDL247W	1830 nt		5.52	□□□□□ -1.53
CAF16	P43569	YJL163C	YJL163C	1668 nt		5.52	□□□□□ -1.53
CAF16	P43569	CRZ1	YNL027W	2037 nt		5.52	□□□□□ -1.53
CAF16	P43569	NGR1	YBR212W	2019 nt		5.52	□□□□□ -1.53
CAF16	P43569	YIR007W	YIR007W	2295 nt		5.51	□□□□□ -1.53
CAF16	P43569	YER085C	YER085C	522 nt		5.51	□□□□□ -1.53
CAF16	P43569	SPG1	YGR236C	288 nt		5.51	□□□□□ -1.53
CAF16	P43569	YIR021W-A	YIR021W-A	213 nt		5.51	□□□□□ -1.53
CAF16	P43569	GEP5	YLR091W	882 nt		5.51	□□□□□ -1.53
CAF16	P43569	PTH2	YBL057C	627 nt		5.51	□□□□□ -1.53
CAF16	P43569	YNL120C	YNL120C	486 nt		5.51	□□□□□ -1.53
CAF16	P43569	YBL094C	YBL094C	333 nt		5.51	□□□□□ -1.53
CAF16	P43569	TGS1	YPL157W	948 nt		5.51	□□□□□ -1.53
CAF16	P43569	KCH1	YJR054W	1494 nt		5.51	□□□□□ -1.53
CAF16	P43569	CTS2	YDR371W	1536 nt		5.5	□□□□□ -1.53
CAF16	P43569	CNE1	YAL058W	1509 nt		5.5	□□□□□ -1.53
CAF16	P43569	YER010C	YER010C	705 nt		5.5	□□□□□ -1.53
CAF16	P43569	AIM24	YJR080C	1185 nt		5.5	□□□□□ -1.53
CAF16	P43569	TTI2	YJR136C	1266 nt		5.5	□□□□□ -1.53
CAF16	P43569	TMA46	YOR091W	1038 nt		5.5	□□□□□ -1.53
CAF16	P43569	CTF19	YPL018W	1110 nt		5.5	□□□□□ -1.53
CAF16	P43569	PRM4	YPL156C	855 nt		5.5	□□□□□ -1.53
CAF16	P43569	TUL1	YKL034W	2277 nt		5.5	□□□□□ -1.53
CAF16	P43569	EPS1	YIL005W	2106 nt		5.5	□□□□□ -1.53
CAF16	P43569	MEC3	YLR288C	1425 nt		5.49	□□□□□ -1.53
CAF16	P43569	ERG7	YHR072W	2196 nt		5.49	□□□□□ -1.53
CAF16	P43569	YDL186W	YDL186W	834 nt		5.49	□□□□□ -1.53
CAF16	P43569	AGX1	YFL030W	1158 nt		5.49	□□□□□ -1.53
CAF16	P43569	ERG25	YGR060W	930 nt		5.49	□□□□□ -1.53
CAF16	P43569	MRS1	YIR021W	1092 nt		5.49	□□□□□ -1.53
CAF16	P43569	POP8	YBL018C	402 nt		5.49	□□□□□ -1.53
CAF16	P43569	KSH1	YNL024C-A	219 nt		5.49	□□□□□ -1.53
CAF16	P43569	PRS4	YBL068W	981 nt		5.49	□□□□□ -1.53
CAF16	P43569	YNR005C	YNR005C	405 nt		5.49	□□□□□ -1.53
CAF16	P43569	YOL118C	YOL118C	309 nt		5.49	□□□□□ -1.53
CAF16	P43569	TAF3	YPL011C	1062 nt		5.49	□□□□□ -1.53
CAF16	P43569	YPL250W-A	YPL250W-A	288 nt		5.49	□□□□□ -1.53
CAF16	P43569	YPR130C	YPR130C	408 nt		5.49	□□□□□ -1.53
CAF16	P43569	SMX3	YPR182W	261 nt		5.49	□□□□□ -1.53
CAF16	P43569	NHP6B	YBR089C-A	300 nt		5.49	□□□□□ -1.53
CAF16	P43569	CSH1	YBR161W	1131 nt		5.49	□□□□□ -1.53
CAF16	P43569	FBP26	YJL155C	1359 nt		5.49	□□□□□ -1.53
CAF16	P43569	HIR1	YBL008W	2523 nt		5.49	□□□□□ -1.53
CAF16	P43569	GPB2	YAL056W	2643 nt		5.49	□□□□□ -1.53
CAF16	P43569	GAS3	YMR215W	1575 nt		5.49	□□□□□ -1.53
CAF16	P43569	RGP1	YDR137W	1992 nt		5.49	□□□□□ -1.53
CAF16	P43569	YTA12	YMR089C	2478 nt		5.49	□□□□□ -1.53
CAF16	P43569	DBF2	YGR092W	1719 nt		5.48	□□□□□ -1.53
CAF16	P43569	ARB1	YER036C	1833 nt		5.48	□□□□□ -1.53
CAF16	P43569	UBA1	YKL210W	3075 nt		5.48	□□□□□ -1.53
CAF16	P43569	GGA1	YDR358W	1674 nt		5.48	□□□□□ -1.53
CAF16	P43569	GUD1	YDL238C	1470 nt		5.48	□□□□□ -1.53

Retrieved 100 of 7,029 protein–RNA pairs in 16 ms