Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 STE7YDL159W 1548 nt5.72□□□□□ -1.49
MSH1P25846 OMS1YDR316W 1416 nt5.72□□□□□ -1.49
MSH1P25846 MTF2YDL044C 1323 nt5.72□□□□□ -1.49
MSH1P25846 YJR124CYJR124C 1347 nt5.72□□□□□ -1.49
MSH1P25846 FKH1YIL131C 1455 nt5.71□□□□□ -1.49
MSH1P25846 NGR1YBR212W 2019 nt5.71□□□□□ -1.5
MSH1P25846 RPS16BYDL083C 432 nt5.71□□□□□ -1.5
MSH1P25846 PPG1YNR032W 1107 nt5.71□□□□□ -1.5
MSH1P25846 OAZ1YPL052W 879 nt5.71□□□□□ -1.5
MSH1P25846 CDC4YFL009W 2340 nt5.71□□□□□ -1.5
MSH1P25846 PUF3YLL013C 2640 nt5.7□□□□□ -1.5
MSH1P25846 CBP4YGR174C 513 nt5.7□□□□□ -1.5
MSH1P25846 SDA1YGR245C 2304 nt5.7□□□□□ -1.5
MSH1P25846 TUL1YKL034W 2277 nt5.69□□□□□ -1.5
MSH1P25846 UGA1YGR019W 1416 nt5.69□□□□□ -1.5
MSH1P25846 NVJ1YHR195W 966 nt5.69□□□□□ -1.5
MSH1P25846 XPT1YJR133W 630 nt5.69□□□□□ -1.5
MSH1P25846 YNL019CYNL019C 855 nt5.69□□□□□ -1.5
MSH1P25846 YNL033WYNL033W 855 nt5.69□□□□□ -1.5
MSH1P25846 DCI1YOR180C 816 nt5.69□□□□□ -1.5
MSH1P25846 PAF1YBR279W 1338 nt5.69□□□□□ -1.5
MSH1P25846 CYK3YDL117W 2658 nt5.69□□□□□ -1.5
MSH1P25846 QDR1YIL120W 1692 nt5.69□□□□□ -1.5
MSH1P25846 YDL022C-AYDL022C-A 249 nt5.68□□□□□ -1.5
MSH1P25846 MOB2YFL034C-B 864 nt5.68□□□□□ -1.5
MSH1P25846 SNO4YMR322C 714 nt5.68□□□□□ -1.5
MSH1P25846 HSP33YOR391C 714 nt5.68□□□□□ -1.5
MSH1P25846 YPL073CYPL073C 486 nt5.68□□□□□ -1.5
MSH1P25846 HSP32YPL280W 714 nt5.68□□□□□ -1.5
MSH1P25846 ISA2YPR067W 558 nt5.68□□□□□ -1.5
MSH1P25846 STE50YCL032W 1041 nt5.68□□□□□ -1.5
MSH1P25846 HOF1YMR032W 2010 nt5.67□□□□□ -1.5
MSH1P25846 YDL183CYDL183C 963 nt5.67□□□□□ -1.5
MSH1P25846 CAD1YDR423C 1230 nt5.67□□□□□ -1.5
MSH1P25846 GRE3YHR104W 984 nt5.67□□□□□ -1.5
MSH1P25846 RHO3YIL118W 696 nt5.67□□□□□ -1.5
MSH1P25846 YOL050CYOL050C 321 nt5.67□□□□□ -1.5
MSH1P25846 YOR024WYOR024W 324 nt5.67□□□□□ -1.5
MSH1P25846 ISU2YOR226C 471 nt5.67□□□□□ -1.5
MSH1P25846 NRG2YBR066C 663 nt5.67□□□□□ -1.5
MSH1P25846 snR32snR32 188 nt5.67□□□□□ -1.5
MSH1P25846 CUE2YKL090W 1332 nt5.67□□□□□ -1.5
MSH1P25846 MMP1YLL061W 1752 nt5.67□□□□□ -1.5
MSH1P25846 RSC30YHR056C 2652 nt5.67□□□□□ -1.5
MSH1P25846 TRK2YKR050W 2670 nt5.67□□□□□ -1.5
MSH1P25846 NUD1YOR373W 2556 nt5.66□□□□□ -1.5
MSH1P25846 AAD4YDL243C 990 nt5.66□□□□□ -1.5
MSH1P25846 SUA5YGL169W 1281 nt5.66□□□□□ -1.5
MSH1P25846 YIL086CYIL086C 309 nt5.66□□□□□ -1.5
MSH1P25846 MTC2YKL098W 1074 nt5.66□□□□□ -1.5
MSH1P25846 YLR124WYLR124W 345 nt5.66□□□□□ -1.5
MSH1P25846 CSL4YNL232W 879 nt5.66□□□□□ -1.5
MSH1P25846 ACS2YLR153C 2052 nt5.66□□□□□ -1.5
MSH1P25846 YHR182WYHR182W 2358 nt5.66□□□□□ -1.5
MSH1P25846 UBP7YIL156W 3216 nt5.66□□□□□ -1.5
MSH1P25846 IBA57YJR122W 1494 nt5.65□□□□□ -1.5
MSH1P25846 CLA4YNL298W 2529 nt5.65□□□□□ -1.5
MSH1P25846 MCM21YDR318W 1107 nt5.65□□□□□ -1.5
MSH1P25846 REX3YLR107W 1215 nt5.65□□□□□ -1.5
MSH1P25846 RPL3YOR063W 1164 nt5.65□□□□□ -1.5
MSH1P25846 ENV9YOR246C 993 nt5.65□□□□□ -1.5
MSH1P25846 ATG1YGL180W 2694 nt5.64□□□□□ -1.51
MSH1P25846 DED81YHR019C 1665 nt5.64□□□□□ -1.51
MSH1P25846 YDL119CYDL119C 924 nt5.64□□□□□ -1.51
MSH1P25846 YEL074WYEL074W 339 nt5.64□□□□□ -1.51
MSH1P25846 YKR104WYKR104W 921 nt5.64□□□□□ -1.51
MSH1P25846 RAD17YOR368W 1206 nt5.64□□□□□ -1.51
MSH1P25846 ECM33YBR078W 1290 nt5.64□□□□□ -1.51
MSH1P25846 snR3snR3 194 nt5.64□□□□□ -1.51
MSH1P25846 VMA13YPR036W 1437 nt5.64□□□□□ -1.51
MSH1P25846 CAF4YKR036C 1932 nt5.64□□□□□ -1.51
MSH1P25846 YIL067CYIL067C 2037 nt5.64□□□□□ -1.51
MSH1P25846 ARB1YER036C 1833 nt5.63□□□□□ -1.51
MSH1P25846 YDL144CYDL144C 1071 nt5.63□□□□□ -1.51
MSH1P25846 YFR052C-AYFR052C-A 306 nt5.63□□□□□ -1.51
MSH1P25846 PAN6YIL145C 930 nt5.63□□□□□ -1.51
MSH1P25846 PAU17YLL025W 375 nt5.63□□□□□ -1.51
MSH1P25846 SPS18YNL204C 903 nt5.63□□□□□ -1.51
MSH1P25846 YMD8YML038C 1329 nt5.63□□□□□ -1.51
MSH1P25846 CDC19YAL038W 1503 nt5.63□□□□□ -1.51
MSH1P25846 YIL028WYIL028W 399 nt5.62□□□□□ -1.51
MSH1P25846 SFK1YKL051W 1062 nt5.62□□□□□ -1.51
MSH1P25846 SEC13YLR208W 894 nt5.62□□□□□ -1.51
MSH1P25846 SCO1YBR037C 888 nt5.62□□□□□ -1.51
MSH1P25846 SUE1YPR151C 621 nt5.62□□□□□ -1.51
MSH1P25846 SIS2YKR072C 1689 nt5.62□□□□□ -1.51
MSH1P25846 SHE10YGL228W 1734 nt5.61□□□□□ -1.51
MSH1P25846 CBP1YJL209W 1965 nt5.61□□□□□ -1.51
MSH1P25846 MRPL36YBR122C 534 nt5.61□□□□□ -1.51
MSH1P25846 CKS1YBR135W 453 nt5.61□□□□□ -1.51
MSH1P25846 KIP2YPL155C 2121 nt5.6□□□□□ -1.51
MSH1P25846 MGS1YNL218W 1764 nt5.6□□□□□ -1.51
MSH1P25846 HXT7YDR342C 1713 nt5.6□□□□□ -1.51
MSH1P25846 HXT6YDR343C 1713 nt5.6□□□□□ -1.51
MSH1P25846 MET3YJR010W 1536 nt5.6□□□□□ -1.51
MSH1P25846 YCL065WYCL065W 369 nt5.6□□□□□ -1.51
MSH1P25846 DON1YDR273W 1098 nt5.6□□□□□ -1.51
MSH1P25846 YDR445CYDR445C 408 nt5.6□□□□□ -1.51
MSH1P25846 YGR273CYGR273C 525 nt5.6□□□□□ -1.51
MSH1P25846 PGA3YML125C 939 nt5.6□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms