Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.87■□□□□ 0.77
CCL1P22362 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCL1P22362 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL1P22362 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.87■□□□□ 0.77
CCL1P22362 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL1P22362 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.87■□□□□ 0.77
CCL1P22362 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL1P22362 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCL1P22362 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCL1P22362 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 AC022616.5-201ENST00000518796 181 ntBASIC19.86■□□□□ 0.77
CCL1P22362 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCL1P22362 AL022069.1-201ENST00000568025 1636 ntBASIC19.86■□□□□ 0.77
CCL1P22362 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL1P22362 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCL1P22362 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCL1P22362 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.86■□□□□ 0.77
CCL1P22362 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL1P22362 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
CCL1P22362 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL1P22362 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCL1P22362 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL1P22362 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL1P22362 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.85■□□□□ 0.77
CCL1P22362 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL1P22362 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCL1P22362 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCL1P22362 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL1P22362 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL1P22362 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
CCL1P22362 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.84■□□□□ 0.77
CCL1P22362 ABHD17AP5-201ENST00000580133 923 ntBASIC19.84■□□□□ 0.77
CCL1P22362 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL1P22362 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCL1P22362 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.84■□□□□ 0.77
CCL1P22362 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL1P22362 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCL1P22362 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.83■□□□□ 0.77
CCL1P22362 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.83■□□□□ 0.77
CCL1P22362 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCL1P22362 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.83■□□□□ 0.76
CCL1P22362 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL1P22362 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.83■□□□□ 0.76
CCL1P22362 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCL1P22362 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL1P22362 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL1P22362 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
CCL1P22362 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.82■□□□□ 0.76
CCL1P22362 NTF6A-201ENST00000591175 560 ntBASIC19.82■□□□□ 0.76
CCL1P22362 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.82■□□□□ 0.76
CCL1P22362 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL1P22362 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL1P22362 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL1P22362 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.82■□□□□ 0.76
CCL1P22362 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 ANOS2P-203ENST00000472227 1816 ntBASIC19.81■□□□□ 0.76
CCL1P22362 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCL1P22362 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.81■□□□□ 0.76
CCL1P22362 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.81■□□□□ 0.76
CCL1P22362 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCL1P22362 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCL1P22362 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 AC131274.2-201ENST00000580697 1507 ntBASIC19.81■□□□□ 0.76
CCL1P22362 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL1P22362 AC092068.2-201ENST00000590491 1708 ntBASIC19.8■□□□□ 0.76
CCL1P22362 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.8■□□□□ 0.76
CCL1P22362 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.8■□□□□ 0.76
CCL1P22362 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.8■□□□□ 0.76
CCL1P22362 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL1P22362 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCL1P22362 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL1P22362 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL1P22362 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL1P22362 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.79■□□□□ 0.76
CCL1P22362 AC139795.1-202ENST00000500444 432 ntBASIC19.79■□□□□ 0.76
CCL1P22362 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.79■□□□□ 0.76
CCL1P22362 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.79■□□□□ 0.76
CCL1P22362 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCL1P22362 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCL1P22362 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL1P22362 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCL1P22362 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.78■□□□□ 0.76
CCL1P22362 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.78■□□□□ 0.76
CCL1P22362 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms