Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.57■■□□□ 1.52
TNFAIP3P21580 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.56■■□□□ 1.52
TNFAIP3P21580 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
TNFAIP3P21580 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 AC004987.1-201ENST00000428627 508 ntBASIC24.56■■□□□ 1.52
TNFAIP3P21580 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.56■■□□□ 1.52
TNFAIP3P21580 AC022616.5-201ENST00000518796 181 ntBASIC24.56■■□□□ 1.52
TNFAIP3P21580 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.56■■□□□ 1.52
TNFAIP3P21580 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.56■■□□□ 1.52
TNFAIP3P21580 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.56■■□□□ 1.52
TNFAIP3P21580 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TNFAIP3P21580 AL161729.1-201ENST00000604104 1402 ntBASIC24.55■■□□□ 1.52
TNFAIP3P21580 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.55■■□□□ 1.52
TNFAIP3P21580 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFAIP3P21580 ATP5G2P3-201ENST00000429083 425 ntBASIC24.55■■□□□ 1.52
TNFAIP3P21580 AC011551.1-201ENST00000614101 683 ntBASIC24.55■■□□□ 1.52
TNFAIP3P21580 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
TNFAIP3P21580 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFAIP3P21580 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFAIP3P21580 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TNFAIP3P21580 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.55■■□□□ 1.52
TNFAIP3P21580 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.55■■□□□ 1.52
TNFAIP3P21580 DUSP8P5-201ENST00000422884 1815 ntBASIC24.54■■□□□ 1.52
TNFAIP3P21580 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFAIP3P21580 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFAIP3P21580 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TNFAIP3P21580 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFAIP3P21580 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
TNFAIP3P21580 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
TNFAIP3P21580 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TNFAIP3P21580 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFAIP3P21580 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.53■■□□□ 1.52
TNFAIP3P21580 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFAIP3P21580 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFAIP3P21580 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
TNFAIP3P21580 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFAIP3P21580 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFAIP3P21580 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFAIP3P21580 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFAIP3P21580 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFAIP3P21580 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
TNFAIP3P21580 AL022069.1-201ENST00000568025 1636 ntBASIC24.51■■□□□ 1.51
TNFAIP3P21580 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNFAIP3P21580 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TNFAIP3P21580 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TNFAIP3P21580 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFAIP3P21580 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFAIP3P21580 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFAIP3P21580 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.5■■□□□ 1.51
TNFAIP3P21580 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
TNFAIP3P21580 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.49■■□□□ 1.51
TNFAIP3P21580 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.49■■□□□ 1.51
TNFAIP3P21580 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 AC074183.2-201ENST00000623112 922 ntBASIC24.49■■□□□ 1.51
TNFAIP3P21580 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TNFAIP3P21580 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFAIP3P21580 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFAIP3P21580 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFAIP3P21580 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFAIP3P21580 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFAIP3P21580 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFAIP3P21580 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFAIP3P21580 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFAIP3P21580 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFAIP3P21580 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
TNFAIP3P21580 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
TNFAIP3P21580 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.47■■□□□ 1.51
TNFAIP3P21580 TSPY13P-201ENST00000338964 914 ntBASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms