Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1AP19438 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.48■□□□□ 0.71
TNFRSF1AP19438 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1AP19438 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1AP19438 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1AP19438 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 AC131274.2-201ENST00000580697 1507 ntBASIC19.47■□□□□ 0.71
TNFRSF1AP19438 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.47■□□□□ 0.71
TNFRSF1AP19438 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TNFRSF1AP19438 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1AP19438 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1AP19438 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.45■□□□□ 0.7
TNFRSF1AP19438 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFRSF1AP19438 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 MIR6724-1-201ENST00000616420 92 ntBASIC19.44■□□□□ 0.7
TNFRSF1AP19438 MIR6724-2-201ENST00000616483 92 ntBASIC19.44■□□□□ 0.7
TNFRSF1AP19438 MIR6724-4-201ENST00000617390 92 ntBASIC19.44■□□□□ 0.7
TNFRSF1AP19438 MIR6724-3-201ENST00000622482 92 ntBASIC19.44■□□□□ 0.7
TNFRSF1AP19438 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1AP19438 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1AP19438 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1AP19438 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 AC141586.4-201ENST00000624558 1573 ntBASIC19.41■□□□□ 0.7
TNFRSF1AP19438 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TNFRSF1AP19438 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1AP19438 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF1AP19438 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF1AP19438 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms