Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 GFA1YKL104C 2154 nt4.61□□□□□ -1.67
RPL40BP0CH09 AIM21YIR003W 2040 nt4.6□□□□□ -1.67
RPL40BP0CH09 RXT3YDL076C 885 nt4.6□□□□□ -1.67
RPL40BP0CH09 YER187WYER187W 426 nt4.6□□□□□ -1.67
RPL40BP0CH09 NSG1YHR133C 876 nt4.6□□□□□ -1.67
RPL40BP0CH09 XPT1YJR133W 630 nt4.6□□□□□ -1.67
RPL40BP0CH09 CTR3YLR411W 726 nt4.6□□□□□ -1.67
RPL40BP0CH09 PPG1YNR032W 1107 nt4.6□□□□□ -1.67
RPL40BP0CH09 YOR024WYOR024W 324 nt4.6□□□□□ -1.67
RPL40BP0CH09 YOR300WYOR300W 309 nt4.6□□□□□ -1.67
RPL40BP0CH09 snR32snR32 188 nt4.6□□□□□ -1.67
RPL40BP0CH09 DFG5YMR238W 1377 nt4.6□□□□□ -1.67
RPL40BP0CH09 DAL81YIR023W 2913 nt4.6□□□□□ -1.67
RPL40BP0CH09 QDR1YIL120W 1692 nt4.6□□□□□ -1.67
RPL40BP0CH09 ASK10YGR097W 3441 nt4.6□□□□□ -1.67
RPL40BP0CH09 YOR1YGR281W 4434 nt4.59□□□□□ -1.67
RPL40BP0CH09 MPM1YJL066C 759 nt4.59□□□□□ -1.67
RPL40BP0CH09 RPL15BYMR121C 615 nt4.59□□□□□ -1.67
RPL40BP0CH09 RRN9YMR270C 1098 nt4.59□□□□□ -1.67
RPL40BP0CH09 snR10snR10 245 nt4.59□□□□□ -1.67
RPL40BP0CH09 CUE5YOR042W 1236 nt4.59□□□□□ -1.67
RPL40BP0CH09 ATF1YOR377W 1578 nt4.59□□□□□ -1.67
RPL40BP0CH09 SNF8YPL002C 702 nt4.59□□□□□ -1.67
RPL40BP0CH09 NGR1YBR212W 2019 nt4.59□□□□□ -1.67
RPL40BP0CH09 UBP9YER098W 2265 nt4.58□□□□□ -1.68
RPL40BP0CH09 PMT2YAL023C 2280 nt4.58□□□□□ -1.68
RPL40BP0CH09 KEX1YGL203C 2190 nt4.58□□□□□ -1.68
RPL40BP0CH09 MGS1YNL218W 1764 nt4.58□□□□□ -1.68
RPL40BP0CH09 YFL034WYFL034W 3222 nt4.58□□□□□ -1.68
RPL40BP0CH09 MRS2YOR334W 1413 nt4.58□□□□□ -1.68
RPL40BP0CH09 YNL194CYNL194C 906 nt4.58□□□□□ -1.68
RPL40BP0CH09 LEM3YNL323W 1245 nt4.58□□□□□ -1.68
RPL40BP0CH09 YPL199CYPL199C 723 nt4.58□□□□□ -1.68
RPL40BP0CH09 SED4YCR067C 3198 nt4.58□□□□□ -1.68
RPL40BP0CH09 EMW1YNL313C 2715 nt4.58□□□□□ -1.68
RPL40BP0CH09 SWI3YJL176C 2478 nt4.57□□□□□ -1.68
RPL40BP0CH09 PAL1YDR348C 1500 nt4.57□□□□□ -1.68
RPL40BP0CH09 DPH6YLR143W 2058 nt4.57□□□□□ -1.68
RPL40BP0CH09 AAD4YDL243C 990 nt4.57□□□□□ -1.68
RPL40BP0CH09 RPA49YNL248C 1248 nt4.57□□□□□ -1.68
RPL40BP0CH09 RPS19BYNL302C 435 nt4.57□□□□□ -1.68
RPL40BP0CH09 CTS1YLR286C 1689 nt4.57□□□□□ -1.68
RPL40BP0CH09 PUS1YPL212C 1635 nt4.57□□□□□ -1.68
RPL40BP0CH09 PHO90YJL198W 2646 nt4.57□□□□□ -1.68
RPL40BP0CH09 CAF4YKR036C 1932 nt4.56□□□□□ -1.68
RPL40BP0CH09 QRI1YDL103C 1434 nt4.56□□□□□ -1.68
RPL40BP0CH09 CUE2YKL090W 1332 nt4.56□□□□□ -1.68
RPL40BP0CH09 SSH4YKL124W 1740 nt4.56□□□□□ -1.68
RPL40BP0CH09 YNG1YOR064C 660 nt4.56□□□□□ -1.68
RPL40BP0CH09 ECM23YPL021W 564 nt4.56□□□□□ -1.68
RPL40BP0CH09 YFR006WYFR006W 1608 nt4.56□□□□□ -1.68
RPL40BP0CH09 MCX1YBR227C 1563 nt4.56□□□□□ -1.68
RPL40BP0CH09 CDC4YFL009W 2340 nt4.56□□□□□ -1.68
RPL40BP0CH09 EHD3YDR036C 1503 nt4.56□□□□□ -1.68
RPL40BP0CH09 JIP4YDR475C 2631 nt4.56□□□□□ -1.68
RPL40BP0CH09 UGA1YGR019W 1416 nt4.55□□□□□ -1.68
RPL40BP0CH09 NOP16YER002W 696 nt4.55□□□□□ -1.68
RPL40BP0CH09 GTO1YGR154C 1071 nt4.55□□□□□ -1.68
RPL40BP0CH09 DBP8YHR169W 1296 nt4.55□□□□□ -1.68
RPL40BP0CH09 ERG20YJL167W 1059 nt4.55□□□□□ -1.68
RPL40BP0CH09 SFK1YKL051W 1062 nt4.55□□□□□ -1.68
RPL40BP0CH09 APS1YLR170C 471 nt4.55□□□□□ -1.68
RPL40BP0CH09 TAF11YML015C 1041 nt4.55□□□□□ -1.68
RPL40BP0CH09 ISU2YOR226C 471 nt4.55□□□□□ -1.68
RPL40BP0CH09 SCO1YBR037C 888 nt4.55□□□□□ -1.68
RPL40BP0CH09 STE7YDL159W 1548 nt4.55□□□□□ -1.68
RPL40BP0CH09 KIP2YPL155C 2121 nt4.55□□□□□ -1.68
RPL40BP0CH09 DPB4YDR121W 591 nt4.54□□□□□ -1.68
RPL40BP0CH09 YFT2YDR319C 825 nt4.54□□□□□ -1.68
RPL40BP0CH09 KRE28YDR532C 1158 nt4.54□□□□□ -1.68
RPL40BP0CH09 CIA2YHR122W 696 nt4.54□□□□□ -1.68
RPL40BP0CH09 AIF1YNR074C 1137 nt4.54□□□□□ -1.68
RPL40BP0CH09 FOX2YKR009C 2703 nt4.54□□□□□ -1.68
RPL40BP0CH09 ATR1YML116W 1629 nt4.54□□□□□ -1.68
RPL40BP0CH09 CYK3YDL117W 2658 nt4.53□□□□□ -1.68
RPL40BP0CH09 BUD7YOR299W 2241 nt4.53□□□□□ -1.68
RPL40BP0CH09 YNL095CYNL095C 1929 nt4.53□□□□□ -1.68
RPL40BP0CH09 RPC53YDL150W 1269 nt4.53□□□□□ -1.68
RPL40BP0CH09 FZF1YGL254W 900 nt4.53□□□□□ -1.68
RPL40BP0CH09 MTF1YMR228W 1026 nt4.53□□□□□ -1.68
RPL40BP0CH09 SOL1YNR034W 966 nt4.53□□□□□ -1.68
RPL40BP0CH09 ECM33YBR078W 1290 nt4.53□□□□□ -1.68
RPL40BP0CH09 MID2YLR332W 1131 nt4.52□□□□□ -1.69
RPL40BP0CH09 GDB1YPR184W 4611 nt4.51□□□□□ -1.69
RPL40BP0CH09 MHF2YDL160C-A 243 nt4.51□□□□□ -1.69
RPL40BP0CH09 TIF34YMR146C 1044 nt4.51□□□□□ -1.69
RPL40BP0CH09 YPL278CYPL278C 303 nt4.51□□□□□ -1.69
RPL40BP0CH09 SUE1YPR151C 621 nt4.51□□□□□ -1.69
RPL40BP0CH09 YKR023WYKR023W 1593 nt4.51□□□□□ -1.69
RPL40BP0CH09 RPL28YGL103W 450 nt4.5□□□□□ -1.69
RPL40BP0CH09 YGP1YNL160W 1065 nt4.5□□□□□ -1.69
RPL40BP0CH09 ARB1YER036C 1833 nt4.5□□□□□ -1.69
RPL40BP0CH09 GUP2YPL189W 1830 nt4.5□□□□□ -1.69
RPL40BP0CH09 NOT3YIL038C 2511 nt4.5□□□□□ -1.69
RPL40BP0CH09 ERG7YHR072W 2196 nt4.5□□□□□ -1.69
RPL40BP0CH09 MAG2YLR427W 2013 nt4.5□□□□□ -1.69
RPL40BP0CH09 HRR25YPL204W 1485 nt4.49□□□□□ -1.69
RPL40BP0CH09 PWP1YLR196W 1731 nt4.49□□□□□ -1.69
RPL40BP0CH09 PIC2YER053C 903 nt4.49□□□□□ -1.69
RPL40BP0CH09 ATP4YPL078C 735 nt4.49□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms