Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 GFA1YKL104C 2154 nt4.61□□□□□ -1.67
RPL40AP0CH08 AIM21YIR003W 2040 nt4.6□□□□□ -1.67
RPL40AP0CH08 RXT3YDL076C 885 nt4.6□□□□□ -1.67
RPL40AP0CH08 YER187WYER187W 426 nt4.6□□□□□ -1.67
RPL40AP0CH08 NSG1YHR133C 876 nt4.6□□□□□ -1.67
RPL40AP0CH08 XPT1YJR133W 630 nt4.6□□□□□ -1.67
RPL40AP0CH08 CTR3YLR411W 726 nt4.6□□□□□ -1.67
RPL40AP0CH08 PPG1YNR032W 1107 nt4.6□□□□□ -1.67
RPL40AP0CH08 YOR024WYOR024W 324 nt4.6□□□□□ -1.67
RPL40AP0CH08 YOR300WYOR300W 309 nt4.6□□□□□ -1.67
RPL40AP0CH08 snR32snR32 188 nt4.6□□□□□ -1.67
RPL40AP0CH08 DFG5YMR238W 1377 nt4.6□□□□□ -1.67
RPL40AP0CH08 DAL81YIR023W 2913 nt4.6□□□□□ -1.67
RPL40AP0CH08 QDR1YIL120W 1692 nt4.6□□□□□ -1.67
RPL40AP0CH08 ASK10YGR097W 3441 nt4.6□□□□□ -1.67
RPL40AP0CH08 YOR1YGR281W 4434 nt4.59□□□□□ -1.67
RPL40AP0CH08 MPM1YJL066C 759 nt4.59□□□□□ -1.67
RPL40AP0CH08 RPL15BYMR121C 615 nt4.59□□□□□ -1.67
RPL40AP0CH08 RRN9YMR270C 1098 nt4.59□□□□□ -1.67
RPL40AP0CH08 snR10snR10 245 nt4.59□□□□□ -1.67
RPL40AP0CH08 CUE5YOR042W 1236 nt4.59□□□□□ -1.67
RPL40AP0CH08 ATF1YOR377W 1578 nt4.59□□□□□ -1.67
RPL40AP0CH08 SNF8YPL002C 702 nt4.59□□□□□ -1.67
RPL40AP0CH08 NGR1YBR212W 2019 nt4.59□□□□□ -1.67
RPL40AP0CH08 UBP9YER098W 2265 nt4.58□□□□□ -1.68
RPL40AP0CH08 PMT2YAL023C 2280 nt4.58□□□□□ -1.68
RPL40AP0CH08 KEX1YGL203C 2190 nt4.58□□□□□ -1.68
RPL40AP0CH08 MGS1YNL218W 1764 nt4.58□□□□□ -1.68
RPL40AP0CH08 YFL034WYFL034W 3222 nt4.58□□□□□ -1.68
RPL40AP0CH08 MRS2YOR334W 1413 nt4.58□□□□□ -1.68
RPL40AP0CH08 YNL194CYNL194C 906 nt4.58□□□□□ -1.68
RPL40AP0CH08 LEM3YNL323W 1245 nt4.58□□□□□ -1.68
RPL40AP0CH08 YPL199CYPL199C 723 nt4.58□□□□□ -1.68
RPL40AP0CH08 SED4YCR067C 3198 nt4.58□□□□□ -1.68
RPL40AP0CH08 EMW1YNL313C 2715 nt4.58□□□□□ -1.68
RPL40AP0CH08 SWI3YJL176C 2478 nt4.57□□□□□ -1.68
RPL40AP0CH08 PAL1YDR348C 1500 nt4.57□□□□□ -1.68
RPL40AP0CH08 DPH6YLR143W 2058 nt4.57□□□□□ -1.68
RPL40AP0CH08 AAD4YDL243C 990 nt4.57□□□□□ -1.68
RPL40AP0CH08 RPA49YNL248C 1248 nt4.57□□□□□ -1.68
RPL40AP0CH08 RPS19BYNL302C 435 nt4.57□□□□□ -1.68
RPL40AP0CH08 CTS1YLR286C 1689 nt4.57□□□□□ -1.68
RPL40AP0CH08 PUS1YPL212C 1635 nt4.57□□□□□ -1.68
RPL40AP0CH08 PHO90YJL198W 2646 nt4.57□□□□□ -1.68
RPL40AP0CH08 CAF4YKR036C 1932 nt4.56□□□□□ -1.68
RPL40AP0CH08 QRI1YDL103C 1434 nt4.56□□□□□ -1.68
RPL40AP0CH08 CUE2YKL090W 1332 nt4.56□□□□□ -1.68
RPL40AP0CH08 SSH4YKL124W 1740 nt4.56□□□□□ -1.68
RPL40AP0CH08 YNG1YOR064C 660 nt4.56□□□□□ -1.68
RPL40AP0CH08 ECM23YPL021W 564 nt4.56□□□□□ -1.68
RPL40AP0CH08 YFR006WYFR006W 1608 nt4.56□□□□□ -1.68
RPL40AP0CH08 MCX1YBR227C 1563 nt4.56□□□□□ -1.68
RPL40AP0CH08 CDC4YFL009W 2340 nt4.56□□□□□ -1.68
RPL40AP0CH08 EHD3YDR036C 1503 nt4.56□□□□□ -1.68
RPL40AP0CH08 JIP4YDR475C 2631 nt4.56□□□□□ -1.68
RPL40AP0CH08 UGA1YGR019W 1416 nt4.55□□□□□ -1.68
RPL40AP0CH08 NOP16YER002W 696 nt4.55□□□□□ -1.68
RPL40AP0CH08 GTO1YGR154C 1071 nt4.55□□□□□ -1.68
RPL40AP0CH08 DBP8YHR169W 1296 nt4.55□□□□□ -1.68
RPL40AP0CH08 ERG20YJL167W 1059 nt4.55□□□□□ -1.68
RPL40AP0CH08 SFK1YKL051W 1062 nt4.55□□□□□ -1.68
RPL40AP0CH08 APS1YLR170C 471 nt4.55□□□□□ -1.68
RPL40AP0CH08 TAF11YML015C 1041 nt4.55□□□□□ -1.68
RPL40AP0CH08 ISU2YOR226C 471 nt4.55□□□□□ -1.68
RPL40AP0CH08 SCO1YBR037C 888 nt4.55□□□□□ -1.68
RPL40AP0CH08 STE7YDL159W 1548 nt4.55□□□□□ -1.68
RPL40AP0CH08 KIP2YPL155C 2121 nt4.55□□□□□ -1.68
RPL40AP0CH08 DPB4YDR121W 591 nt4.54□□□□□ -1.68
RPL40AP0CH08 YFT2YDR319C 825 nt4.54□□□□□ -1.68
RPL40AP0CH08 KRE28YDR532C 1158 nt4.54□□□□□ -1.68
RPL40AP0CH08 CIA2YHR122W 696 nt4.54□□□□□ -1.68
RPL40AP0CH08 AIF1YNR074C 1137 nt4.54□□□□□ -1.68
RPL40AP0CH08 FOX2YKR009C 2703 nt4.54□□□□□ -1.68
RPL40AP0CH08 ATR1YML116W 1629 nt4.54□□□□□ -1.68
RPL40AP0CH08 CYK3YDL117W 2658 nt4.53□□□□□ -1.68
RPL40AP0CH08 BUD7YOR299W 2241 nt4.53□□□□□ -1.68
RPL40AP0CH08 YNL095CYNL095C 1929 nt4.53□□□□□ -1.68
RPL40AP0CH08 RPC53YDL150W 1269 nt4.53□□□□□ -1.68
RPL40AP0CH08 FZF1YGL254W 900 nt4.53□□□□□ -1.68
RPL40AP0CH08 MTF1YMR228W 1026 nt4.53□□□□□ -1.68
RPL40AP0CH08 SOL1YNR034W 966 nt4.53□□□□□ -1.68
RPL40AP0CH08 ECM33YBR078W 1290 nt4.53□□□□□ -1.68
RPL40AP0CH08 MID2YLR332W 1131 nt4.52□□□□□ -1.69
RPL40AP0CH08 GDB1YPR184W 4611 nt4.51□□□□□ -1.69
RPL40AP0CH08 MHF2YDL160C-A 243 nt4.51□□□□□ -1.69
RPL40AP0CH08 TIF34YMR146C 1044 nt4.51□□□□□ -1.69
RPL40AP0CH08 YPL278CYPL278C 303 nt4.51□□□□□ -1.69
RPL40AP0CH08 SUE1YPR151C 621 nt4.51□□□□□ -1.69
RPL40AP0CH08 YKR023WYKR023W 1593 nt4.51□□□□□ -1.69
RPL40AP0CH08 RPL28YGL103W 450 nt4.5□□□□□ -1.69
RPL40AP0CH08 YGP1YNL160W 1065 nt4.5□□□□□ -1.69
RPL40AP0CH08 ARB1YER036C 1833 nt4.5□□□□□ -1.69
RPL40AP0CH08 GUP2YPL189W 1830 nt4.5□□□□□ -1.69
RPL40AP0CH08 NOT3YIL038C 2511 nt4.5□□□□□ -1.69
RPL40AP0CH08 ERG7YHR072W 2196 nt4.5□□□□□ -1.69
RPL40AP0CH08 MAG2YLR427W 2013 nt4.5□□□□□ -1.69
RPL40AP0CH08 HRR25YPL204W 1485 nt4.49□□□□□ -1.69
RPL40AP0CH08 PWP1YLR196W 1731 nt4.49□□□□□ -1.69
RPL40AP0CH08 PIC2YER053C 903 nt4.49□□□□□ -1.69
RPL40AP0CH08 ATP4YPL078C 735 nt4.49□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms