Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RAB40ALP0C0E4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 AC005837.3-201ENST00000612163 286 ntBASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 MIR6089-201ENST00000616698 64 ntBASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB40ALP0C0E4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 SLC6A10P-202ENST00000431994 2058 ntBASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RAB40ALP0C0E4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB40ALP0C0E4 MIR935-201ENST00000401179 91 ntBASIC21.68■■□□□ 1.06
RAB40ALP0C0E4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.68■■□□□ 1.06
RAB40ALP0C0E4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB40ALP0C0E4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RAB40ALP0C0E4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB40ALP0C0E4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RAB40ALP0C0E4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 AC106739.1-201ENST00000617035 715 ntBASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB40ALP0C0E4 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 AC131274.2-201ENST00000580697 1507 ntBASIC21.65■■□□□ 1.06
RAB40ALP0C0E4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RAB40ALP0C0E4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40ALP0C0E4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 PBX2P1-201ENST00000493219 1291 ntBASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB40ALP0C0E4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 UNC93B3-201ENST00000308076 687 ntBASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB40ALP0C0E4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40ALP0C0E4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 AL022069.1-201ENST00000568025 1636 ntBASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms