Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.95■□□□□ 0.94
FREM3P0C091 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.95■□□□□ 0.94
FREM3P0C091 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.95■□□□□ 0.94
FREM3P0C091 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FREM3P0C091 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
FREM3P0C091 MIR3621-201ENST00000580529 85 ntBASIC20.95■□□□□ 0.94
FREM3P0C091 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.95■□□□□ 0.94
FREM3P0C091 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.95■□□□□ 0.94
FREM3P0C091 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.95■□□□□ 0.94
FREM3P0C091 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
FREM3P0C091 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FREM3P0C091 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.94■□□□□ 0.94
FREM3P0C091 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.94■□□□□ 0.94
FREM3P0C091 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FREM3P0C091 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.94■□□□□ 0.94
FREM3P0C091 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FREM3P0C091 AL512631.2-201ENST00000604634 923 ntBASIC20.94■□□□□ 0.94
FREM3P0C091 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.94■□□□□ 0.94
FREM3P0C091 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FREM3P0C091 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FREM3P0C091 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FREM3P0C091 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.93■□□□□ 0.94
FREM3P0C091 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FREM3P0C091 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.93■□□□□ 0.94
FREM3P0C091 MIR6089-201ENST00000616698 64 ntBASIC20.93■□□□□ 0.94
FREM3P0C091 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.93■□□□□ 0.94
FREM3P0C091 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.93■□□□□ 0.94
FREM3P0C091 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FREM3P0C091 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FREM3P0C091 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.93■□□□□ 0.94
FREM3P0C091 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.93■□□□□ 0.94
FREM3P0C091 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FREM3P0C091 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FREM3P0C091 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
FREM3P0C091 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FREM3P0C091 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FREM3P0C091 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.92■□□□□ 0.94
FREM3P0C091 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FREM3P0C091 AL117332.1-201ENST00000622628 974 ntBASIC20.92■□□□□ 0.94
FREM3P0C091 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
FREM3P0C091 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FREM3P0C091 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FREM3P0C091 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FREM3P0C091 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FREM3P0C091 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.91■□□□□ 0.94
FREM3P0C091 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
FREM3P0C091 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.91■□□□□ 0.94
FREM3P0C091 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.91■□□□□ 0.94
FREM3P0C091 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FREM3P0C091 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
FREM3P0C091 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
FREM3P0C091 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FREM3P0C091 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.9■□□□□ 0.94
FREM3P0C091 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FREM3P0C091 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.9■□□□□ 0.94
FREM3P0C091 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FREM3P0C091 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
FREM3P0C091 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FREM3P0C091 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
FREM3P0C091 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
FREM3P0C091 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
FREM3P0C091 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
FREM3P0C091 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
FREM3P0C091 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.89■□□□□ 0.94
FREM3P0C091 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FREM3P0C091 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FREM3P0C091 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FREM3P0C091 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FREM3P0C091 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FREM3P0C091 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.88■□□□□ 0.93
FREM3P0C091 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FREM3P0C091 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FREM3P0C091 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FREM3P0C091 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.87■□□□□ 0.93
FREM3P0C091 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FREM3P0C091 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FREM3P0C091 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FREM3P0C091 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FREM3P0C091 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FREM3P0C091 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FREM3P0C091 AL356740.2-201ENST00000601559 647 ntBASIC20.87■□□□□ 0.93
FREM3P0C091 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM3P0C091 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM3P0C091 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM3P0C091 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.86■□□□□ 0.93
FREM3P0C091 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM3P0C091 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
FREM3P0C091 AP003733.4-201ENST00000623785 1697 ntBASIC20.86■□□□□ 0.93
FREM3P0C091 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.86■□□□□ 0.93
FREM3P0C091 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.86■□□□□ 0.93
FREM3P0C091 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM3P0C091 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.86■□□□□ 0.93
FREM3P0C091 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.85■□□□□ 0.93
FREM3P0C091 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms