Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOD3P08294 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SOD3P08294 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SOD3P08294 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.81■□□□□ 0.76
SOD3P08294 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.81■□□□□ 0.76
SOD3P08294 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.81■□□□□ 0.76
SOD3P08294 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SOD3P08294 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOD3P08294 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOD3P08294 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.8■□□□□ 0.76
SOD3P08294 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SOD3P08294 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.79■□□□□ 0.76
SOD3P08294 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.79■□□□□ 0.76
SOD3P08294 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SOD3P08294 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.79■□□□□ 0.76
SOD3P08294 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.79■□□□□ 0.76
SOD3P08294 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.79■□□□□ 0.76
SOD3P08294 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.79■□□□□ 0.76
SOD3P08294 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOD3P08294 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOD3P08294 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SOD3P08294 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOD3P08294 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.78■□□□□ 0.76
SOD3P08294 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOD3P08294 AC004448.1-201ENST00000458332 883 ntBASIC19.78■□□□□ 0.76
SOD3P08294 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.78■□□□□ 0.76
SOD3P08294 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.78■□□□□ 0.76
SOD3P08294 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SOD3P08294 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SOD3P08294 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.77■□□□□ 0.76
SOD3P08294 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOD3P08294 AC133561.4-201ENST00000566112 224 ntBASIC19.77■□□□□ 0.76
SOD3P08294 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.77■□□□□ 0.76
SOD3P08294 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOD3P08294 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.76■□□□□ 0.75
SOD3P08294 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.76■□□□□ 0.75
SOD3P08294 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
SOD3P08294 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOD3P08294 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOD3P08294 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.75■□□□□ 0.75
SOD3P08294 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOD3P08294 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOD3P08294 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOD3P08294 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.75■□□□□ 0.75
SOD3P08294 PBX2P1-201ENST00000493219 1291 ntBASIC19.75■□□□□ 0.75
SOD3P08294 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.75■□□□□ 0.75
SOD3P08294 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SOD3P08294 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOD3P08294 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SOD3P08294 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOD3P08294 AC106739.1-201ENST00000617035 715 ntBASIC19.74■□□□□ 0.75
SOD3P08294 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOD3P08294 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOD3P08294 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOD3P08294 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.73■□□□□ 0.75
SOD3P08294 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.73■□□□□ 0.75
SOD3P08294 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOD3P08294 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SOD3P08294 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.73■□□□□ 0.75
SOD3P08294 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOD3P08294 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SOD3P08294 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOD3P08294 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SOD3P08294 UNC93B3-201ENST00000308076 687 ntBASIC19.72■□□□□ 0.75
SOD3P08294 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SOD3P08294 SRD5A1P1-201ENST00000442297 786 ntBASIC19.72■□□□□ 0.75
SOD3P08294 SLC6A10P-202ENST00000431994 2058 ntBASIC19.72■□□□□ 0.75
SOD3P08294 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.72■□□□□ 0.75
SOD3P08294 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SOD3P08294 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SOD3P08294 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SOD3P08294 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.71■□□□□ 0.75
SOD3P08294 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SOD3P08294 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOD3P08294 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms