Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IGKV3-11P04433 LINC00543-201ENST00000567234 1845 ntBASIC21.38■■□□□ 1.01
IGKV3-11P04433 LINC01124-201ENST00000409786 2117 ntBASIC21.38■■□□□ 1.01
IGKV3-11P04433 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.37■■□□□ 1.01
IGKV3-11P04433 AC141586.4-201ENST00000624558 1573 ntBASIC21.37■■□□□ 1.01
IGKV3-11P04433 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.37■■□□□ 1.01
IGKV3-11P04433 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.37■■□□□ 1.01
IGKV3-11P04433 MIR6722-201ENST00000617286 78 ntBASIC21.37■■□□□ 1.01
IGKV3-11P04433 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.37■■□□□ 1.01
IGKV3-11P04433 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3-11P04433 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.37■■□□□ 1.01
IGKV3-11P04433 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
IGKV3-11P04433 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IGKV3-11P04433 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
IGKV3-11P04433 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
IGKV3-11P04433 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.36■■□□□ 1.01
IGKV3-11P04433 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
IGKV3-11P04433 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
IGKV3-11P04433 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IGKV3-11P04433 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.35■■□□□ 1.01
IGKV3-11P04433 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV3-11P04433 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
IGKV3-11P04433 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
IGKV3-11P04433 MTDHP2-201ENST00000601468 714 ntBASIC21.35■■□□□ 1.01
IGKV3-11P04433 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
IGKV3-11P04433 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.35■■□□□ 1.01
IGKV3-11P04433 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV3-11P04433 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV3-11P04433 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.34■■□□□ 1.01
IGKV3-11P04433 AC010997.5-201ENST00000609182 354 ntBASIC21.34■■□□□ 1.01
IGKV3-11P04433 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.34■■□□□ 1.01
IGKV3-11P04433 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
IGKV3-11P04433 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
IGKV3-11P04433 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IGKV3-11P04433 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
IGKV3-11P04433 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IGKV3-11P04433 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
IGKV3-11P04433 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.33■■□□□ 1.01
IGKV3-11P04433 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IGKV3-11P04433 AL356441.2-201ENST00000443009 864 ntBASIC21.33■■□□□ 1.01
IGKV3-11P04433 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
IGKV3-11P04433 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.33■■□□□ 1.01
IGKV3-11P04433 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.33■■□□□ 1.01
IGKV3-11P04433 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
IGKV3-11P04433 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.33■■□□□ 1
IGKV3-11P04433 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.33■■□□□ 1
IGKV3-11P04433 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.32■■□□□ 1
IGKV3-11P04433 KRT16P3-201ENST00000439127 1283 ntBASIC21.32■■□□□ 1
IGKV3-11P04433 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.32■■□□□ 1
IGKV3-11P04433 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.32■■□□□ 1
IGKV3-11P04433 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.32■■□□□ 1
IGKV3-11P04433 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.32■■□□□ 1
IGKV3-11P04433 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV3-11P04433 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
IGKV3-11P04433 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.31■■□□□ 1
IGKV3-11P04433 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.31■■□□□ 1
IGKV3-11P04433 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV3-11P04433 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV3-11P04433 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.3■■□□□ 1
IGKV3-11P04433 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IGKV3-11P04433 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IGKV3-11P04433 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
IGKV3-11P04433 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.3■■□□□ 1
IGKV3-11P04433 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.3■■□□□ 1
IGKV3-11P04433 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.3■■□□□ 1
IGKV3-11P04433 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
IGKV3-11P04433 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
IGKV3-11P04433 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.3■■□□□ 1
IGKV3-11P04433 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IGKV3-11P04433 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IGKV3-11P04433 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.29■■□□□ 1
IGKV3-11P04433 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
IGKV3-11P04433 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.29■■□□□ 1
IGKV3-11P04433 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
IGKV3-11P04433 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.29■■□□□ 1
IGKV3-11P04433 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.28■■□□□ 1
IGKV3-11P04433 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.28■■□□□ 1
IGKV3-11P04433 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.27■■□□□ 1
IGKV3-11P04433 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
IGKV3-11P04433 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
IGKV3-11P04433 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
IGKV3-11P04433 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
IGKV3-11P04433 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.27■■□□□ 1
IGKV3-11P04433 MIR6724-1-201ENST00000616420 92 ntBASIC21.27■■□□□ 1
IGKV3-11P04433 MIR6724-2-201ENST00000616483 92 ntBASIC21.27■■□□□ 1
IGKV3-11P04433 MIR6724-4-201ENST00000617390 92 ntBASIC21.27■■□□□ 1
IGKV3-11P04433 MIR6724-3-201ENST00000622482 92 ntBASIC21.27■■□□□ 1
IGKV3-11P04433 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IGKV3-11P04433 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
IGKV3-11P04433 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IGKV3-11P04433 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IGKV3-11P04433 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
IGKV3-11P04433 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IGKV3-11P04433 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms