Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.18■■□□□ 1.14
KRT6AP02538 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
KRT6AP02538 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KRT6AP02538 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 BHLHE23-202ENST00000612929 1109 ntBASIC22.17■■□□□ 1.14
KRT6AP02538 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.17■■□□□ 1.14
KRT6AP02538 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.17■■□□□ 1.14
KRT6AP02538 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT6AP02538 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.16■■□□□ 1.14
KRT6AP02538 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
KRT6AP02538 DUSP8P5-201ENST00000422884 1815 ntBASIC22.16■■□□□ 1.14
KRT6AP02538 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.16■■□□□ 1.14
KRT6AP02538 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.16■■□□□ 1.14
KRT6AP02538 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KRT6AP02538 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT6AP02538 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
KRT6AP02538 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT6AP02538 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT6AP02538 AL022069.1-201ENST00000568025 1636 ntBASIC22.16■■□□□ 1.14
KRT6AP02538 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT6AP02538 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
KRT6AP02538 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
KRT6AP02538 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.15■■□□□ 1.14
KRT6AP02538 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.15■■□□□ 1.14
KRT6AP02538 ATP5G2P3-201ENST00000429083 425 ntBASIC22.15■■□□□ 1.14
KRT6AP02538 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.15■■□□□ 1.14
KRT6AP02538 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.15■■□□□ 1.14
KRT6AP02538 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 AC074183.2-201ENST00000623112 922 ntBASIC22.15■■□□□ 1.14
KRT6AP02538 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
KRT6AP02538 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
KRT6AP02538 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.15■■□□□ 1.14
KRT6AP02538 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
KRT6AP02538 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
KRT6AP02538 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.15■■□□□ 1.14
KRT6AP02538 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRT6AP02538 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
KRT6AP02538 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.14■■□□□ 1.14
KRT6AP02538 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
KRT6AP02538 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
KRT6AP02538 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRT6AP02538 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRT6AP02538 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRT6AP02538 AC004987.1-201ENST00000428627 508 ntBASIC22.14■■□□□ 1.13
KRT6AP02538 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.14■■□□□ 1.13
KRT6AP02538 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRT6AP02538 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.14■■□□□ 1.13
KRT6AP02538 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
KRT6AP02538 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.14■■□□□ 1.13
KRT6AP02538 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.14■■□□□ 1.13
KRT6AP02538 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.13■■□□□ 1.13
KRT6AP02538 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.13■■□□□ 1.13
KRT6AP02538 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
KRT6AP02538 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRT6AP02538 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KRT6AP02538 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
KRT6AP02538 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
KRT6AP02538 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
KRT6AP02538 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.12■■□□□ 1.13
KRT6AP02538 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
KRT6AP02538 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.12■■□□□ 1.13
KRT6AP02538 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
KRT6AP02538 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.11■■□□□ 1.13
KRT6AP02538 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
KRT6AP02538 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT6AP02538 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.11■■□□□ 1.13
KRT6AP02538 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT6AP02538 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
KRT6AP02538 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.11■■□□□ 1.13
KRT6AP02538 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.11■■□□□ 1.13
KRT6AP02538 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.11■■□□□ 1.13
KRT6AP02538 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT6AP02538 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
KRT6AP02538 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT6AP02538 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms