Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AL161729.1-201ENST00000604104 1402 ntBASIC24.8■■□□□ 1.56
HLA-DRAP01903 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.8■■□□□ 1.56
HLA-DRAP01903 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.8■■□□□ 1.56
HLA-DRAP01903 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HLA-DRAP01903 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HLA-DRAP01903 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.79■■□□□ 1.56
HLA-DRAP01903 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HLA-DRAP01903 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
HLA-DRAP01903 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.79■■□□□ 1.56
HLA-DRAP01903 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.79■■□□□ 1.56
HLA-DRAP01903 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.79■■□□□ 1.56
HLA-DRAP01903 Z92544.1-202ENST00000571933 1220 ntBASIC24.79■■□□□ 1.56
HLA-DRAP01903 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.79■■□□□ 1.56
HLA-DRAP01903 AL035685.1-201ENST00000636663 812 ntBASIC24.79■■□□□ 1.56
HLA-DRAP01903 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HLA-DRAP01903 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.79■■□□□ 1.56
HLA-DRAP01903 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
HLA-DRAP01903 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.78■■□□□ 1.56
HLA-DRAP01903 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.78■■□□□ 1.56
HLA-DRAP01903 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
HLA-DRAP01903 AC239859.2-201ENST00000444165 318 ntBASIC24.78■■□□□ 1.56
HLA-DRAP01903 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HLA-DRAP01903 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HLA-DRAP01903 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.77■■□□□ 1.56
HLA-DRAP01903 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
HLA-DRAP01903 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.77■■□□□ 1.56
HLA-DRAP01903 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
HLA-DRAP01903 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
HLA-DRAP01903 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.76■■□□□ 1.55
HLA-DRAP01903 AC004448.1-201ENST00000458332 883 ntBASIC24.76■■□□□ 1.55
HLA-DRAP01903 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.76■■□□□ 1.55
HLA-DRAP01903 KRT125P-201ENST00000546827 989 ntBASIC24.76■■□□□ 1.55
HLA-DRAP01903 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HLA-DRAP01903 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HLA-DRAP01903 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
HLA-DRAP01903 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HLA-DRAP01903 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HLA-DRAP01903 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HLA-DRAP01903 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.75■■□□□ 1.55
HLA-DRAP01903 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
HLA-DRAP01903 SNX5-217ENST00000606557 1087 ntBASIC24.75■■□□□ 1.55
HLA-DRAP01903 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HLA-DRAP01903 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HLA-DRAP01903 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
HLA-DRAP01903 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HLA-DRAP01903 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HLA-DRAP01903 MIR4787-201ENST00000607364 84 ntBASIC24.74■■□□□ 1.55
HLA-DRAP01903 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.74■■□□□ 1.55
HLA-DRAP01903 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.74■■□□□ 1.55
HLA-DRAP01903 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
HLA-DRAP01903 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
HLA-DRAP01903 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
HLA-DRAP01903 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HLA-DRAP01903 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.73■■□□□ 1.55
HLA-DRAP01903 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HLA-DRAP01903 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HLA-DRAP01903 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HLA-DRAP01903 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HLA-DRAP01903 ABCB10P4-201ENST00000566803 2184 ntBASIC24.73■■□□□ 1.55
HLA-DRAP01903 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HLA-DRAP01903 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
HLA-DRAP01903 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.72■■□□□ 1.55
HLA-DRAP01903 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HLA-DRAP01903 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.72■■□□□ 1.55
HLA-DRAP01903 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
HLA-DRAP01903 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
HLA-DRAP01903 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
HLA-DRAP01903 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
HLA-DRAP01903 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HLA-DRAP01903 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.71■■□□□ 1.55
HLA-DRAP01903 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.71■■□□□ 1.55
HLA-DRAP01903 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.71■■□□□ 1.55
HLA-DRAP01903 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.71■■□□□ 1.55
HLA-DRAP01903 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HLA-DRAP01903 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.7■■□□□ 1.54
HLA-DRAP01903 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HLA-DRAP01903 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.7■■□□□ 1.54
HLA-DRAP01903 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.7■■□□□ 1.54
HLA-DRAP01903 AC092028.1-203ENST00000608262 953 ntBASIC24.7■■□□□ 1.54
HLA-DRAP01903 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
HLA-DRAP01903 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
HLA-DRAP01903 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HLA-DRAP01903 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HLA-DRAP01903 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.69■■□□□ 1.54
HLA-DRAP01903 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HLA-DRAP01903 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HLA-DRAP01903 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HLA-DRAP01903 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.68■■□□□ 1.54
HLA-DRAP01903 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HLA-DRAP01903 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HLA-DRAP01903 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
HLA-DRAP01903 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
HLA-DRAP01903 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
HLA-DRAP01903 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms