Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
RAPGEF3O95398 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35.2■■■■□ 3.23
RAPGEF3O95398 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
RAPGEF3O95398 VPS53-216ENST00000574029 585 ntTSL 4 BASIC35.2■■■■□ 3.23
RAPGEF3O95398 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC35.2■■■■□ 3.23
RAPGEF3O95398 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC35.2■■■■□ 3.23
RAPGEF3O95398 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
RAPGEF3O95398 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
RAPGEF3O95398 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC35.19■■■■□ 3.22
RAPGEF3O95398 HLA-L-209ENST00000420110 1011 ntBASIC35.19■■■■□ 3.22
RAPGEF3O95398 AC006455.2-201ENST00000429931 906 ntBASIC35.19■■■■□ 3.22
RAPGEF3O95398 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC35.19■■■■□ 3.22
RAPGEF3O95398 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC35.19■■■■□ 3.22
RAPGEF3O95398 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC35.19■■■■□ 3.22
RAPGEF3O95398 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
RAPGEF3O95398 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
RAPGEF3O95398 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC35.18■■■■□ 3.22
RAPGEF3O95398 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC35.18■■■■□ 3.22
RAPGEF3O95398 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22
RAPGEF3O95398 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
RAPGEF3O95398 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
RAPGEF3O95398 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC35.18■■■■□ 3.22
RAPGEF3O95398 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC35.18■■■■□ 3.22
RAPGEF3O95398 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC35.17■■■■□ 3.22
RAPGEF3O95398 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC35.17■■■■□ 3.22
RAPGEF3O95398 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
RAPGEF3O95398 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
RAPGEF3O95398 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RAPGEF3O95398 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RAPGEF3O95398 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RAPGEF3O95398 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC35.16■■■■□ 3.22
RAPGEF3O95398 AC139426.1-201ENST00000568218 2529 ntBASIC35.16■■■■□ 3.22
RAPGEF3O95398 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RAPGEF3O95398 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
RAPGEF3O95398 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC35.15■■■■□ 3.22
RAPGEF3O95398 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
RAPGEF3O95398 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
RAPGEF3O95398 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
RAPGEF3O95398 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
RAPGEF3O95398 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.13■■■■□ 3.21
RAPGEF3O95398 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC35.13■■■■□ 3.21
RAPGEF3O95398 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC35.13■■■■□ 3.21
RAPGEF3O95398 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC35.12■■■■□ 3.21
RAPGEF3O95398 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC35.12■■■■□ 3.21
RAPGEF3O95398 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.11■■■■□ 3.21
RAPGEF3O95398 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
RAPGEF3O95398 C17orf82-201ENST00000623772 1530 ntBASIC35.11■■■■□ 3.21
RAPGEF3O95398 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
RAPGEF3O95398 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
RAPGEF3O95398 SNX3-202ENST00000349379 890 ntTSL 2 BASIC35.1■■■■□ 3.21
RAPGEF3O95398 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC35.1■■■■□ 3.21
RAPGEF3O95398 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RAPGEF3O95398 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
RAPGEF3O95398 MIR3181-201ENST00000578512 73 ntBASIC35.09■■■■□ 3.21
RAPGEF3O95398 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC35.09■■■■□ 3.21
RAPGEF3O95398 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
RAPGEF3O95398 NME4-202ENST00000382940 766 ntTSL 3 BASIC35.08■■■■□ 3.21
RAPGEF3O95398 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC35.08■■■■□ 3.21
RAPGEF3O95398 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC35.08■■■■□ 3.21
RAPGEF3O95398 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC35.08■■■■□ 3.21
RAPGEF3O95398 NME4-211ENST00000620944 1193 ntTSL 2 BASIC35.08■■■■□ 3.21
RAPGEF3O95398 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC35.08■■■■□ 3.21
RAPGEF3O95398 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
RAPGEF3O95398 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
RAPGEF3O95398 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
RAPGEF3O95398 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.07■■■■□ 3.21
RAPGEF3O95398 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC35.07■■■■□ 3.21
RAPGEF3O95398 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
RAPGEF3O95398 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
RAPGEF3O95398 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC35.07■■■■□ 3.2
RAPGEF3O95398 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
RAPGEF3O95398 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
RAPGEF3O95398 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC35.07■■■■□ 3.2
RAPGEF3O95398 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
RAPGEF3O95398 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
RAPGEF3O95398 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.06■■■■□ 3.2
RAPGEF3O95398 AC027612.3-201ENST00000413684 1047 ntBASIC35.06■■■■□ 3.2
RAPGEF3O95398 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
RAPGEF3O95398 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.06■■■■□ 3.2
RAPGEF3O95398 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC35.06■■■■□ 3.2
RAPGEF3O95398 ESRRAP2-201ENST00000418437 1549 ntBASIC35.06■■■■□ 3.2
RAPGEF3O95398 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
RAPGEF3O95398 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
RAPGEF3O95398 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC35.04■■■■□ 3.2
RAPGEF3O95398 AC123595.1-201ENST00000440769 1046 ntBASIC35.04■■■■□ 3.2
RAPGEF3O95398 AC241377.3-202ENST00000626088 1088 ntBASIC35.04■■■■□ 3.2
RAPGEF3O95398 AC241585.3-202ENST00000628937 1088 ntBASIC35.04■■■■□ 3.2
RAPGEF3O95398 AC245100.8-202ENST00000629247 1058 ntBASIC35.04■■■■□ 3.2
RAPGEF3O95398 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC35.04■■■■□ 3.2
RAPGEF3O95398 TSPY26P-201ENST00000476365 1326 ntBASIC35.04■■■■□ 3.2
RAPGEF3O95398 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
RAPGEF3O95398 AC131274.2-201ENST00000580697 1507 ntBASIC35.03■■■■□ 3.2
RAPGEF3O95398 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC35.03■■■■□ 3.2
RAPGEF3O95398 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
RAPGEF3O95398 GXYLT1P2-201ENST00000433312 1230 ntBASIC35.03■■■■□ 3.2
RAPGEF3O95398 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC35.03■■■■□ 3.2
RAPGEF3O95398 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
RAPGEF3O95398 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC35.02■■■■□ 3.2
RAPGEF3O95398 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC35.02■■■■□ 3.2
RAPGEF3O95398 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC35.02■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms