Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RARRES2P1-201ENST00000474487 481 ntBASIC21.29■■□□□ 1
NKX2-2O95096 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.29■■□□□ 1
NKX2-2O95096 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
NKX2-2O95096 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NKX2-2O95096 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NKX2-2O95096 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NKX2-2O95096 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NKX2-2O95096 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.28■■□□□ 1
NKX2-2O95096 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.28■■□□□ 1
NKX2-2O95096 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NKX2-2O95096 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.28■■□□□ 1
NKX2-2O95096 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
NKX2-2O95096 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKX2-2O95096 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKX2-2O95096 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.27■■□□□ 1
NKX2-2O95096 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKX2-2O95096 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKX2-2O95096 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NKX2-2O95096 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.27■■□□□ 1
NKX2-2O95096 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKX2-2O95096 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.26■□□□□ 0.99
NKX2-2O95096 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.26■□□□□ 0.99
NKX2-2O95096 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKX2-2O95096 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
NKX2-2O95096 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX2-2O95096 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.26■□□□□ 0.99
NKX2-2O95096 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.26■□□□□ 0.99
NKX2-2O95096 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX2-2O95096 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX2-2O95096 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NKX2-2O95096 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
NKX2-2O95096 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NKX2-2O95096 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX2-2O95096 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.25■□□□□ 0.99
NKX2-2O95096 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NKX2-2O95096 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX2-2O95096 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.25■□□□□ 0.99
NKX2-2O95096 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NKX2-2O95096 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NKX2-2O95096 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX2-2O95096 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.25■□□□□ 0.99
NKX2-2O95096 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.25■□□□□ 0.99
NKX2-2O95096 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX2-2O95096 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.24■□□□□ 0.99
NKX2-2O95096 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX2-2O95096 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.24■□□□□ 0.99
NKX2-2O95096 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NKX2-2O95096 AC004448.1-201ENST00000458332 883 ntBASIC21.24■□□□□ 0.99
NKX2-2O95096 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX2-2O95096 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.24■□□□□ 0.99
NKX2-2O95096 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.24■□□□□ 0.99
NKX2-2O95096 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX2-2O95096 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX2-2O95096 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX2-2O95096 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.24■□□□□ 0.99
NKX2-2O95096 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.24■□□□□ 0.99
NKX2-2O95096 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
NKX2-2O95096 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX2-2O95096 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX2-2O95096 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.23■□□□□ 0.99
NKX2-2O95096 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX2-2O95096 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.23■□□□□ 0.99
NKX2-2O95096 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKX2-2O95096 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKX2-2O95096 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKX2-2O95096 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.23■□□□□ 0.99
NKX2-2O95096 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.23■□□□□ 0.99
NKX2-2O95096 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX2-2O95096 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX2-2O95096 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NKX2-2O95096 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.22■□□□□ 0.99
NKX2-2O95096 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.22■□□□□ 0.99
NKX2-2O95096 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NKX2-2O95096 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.22■□□□□ 0.99
NKX2-2O95096 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NKX2-2O95096 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NKX2-2O95096 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NKX2-2O95096 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKX2-2O95096 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKX2-2O95096 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.21■□□□□ 0.99
NKX2-2O95096 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NKX2-2O95096 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.21■□□□□ 0.99
NKX2-2O95096 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NKX2-2O95096 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKX2-2O95096 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NKX2-2O95096 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NKX2-2O95096 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX2-2O95096 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.2■□□□□ 0.98
NKX2-2O95096 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.2■□□□□ 0.98
NKX2-2O95096 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NKX2-2O95096 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX2-2O95096 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NKX2-2O95096 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.2■□□□□ 0.98
NKX2-2O95096 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.2■□□□□ 0.98
NKX2-2O95096 ALDH1A3-203ENST00000557963 1670 ntBASIC21.2■□□□□ 0.98
NKX2-2O95096 AC021242.3-201ENST00000607598 1377 ntBASIC21.2■□□□□ 0.98
NKX2-2O95096 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NKX2-2O95096 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NKX2-2O95096 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NKX2-2O95096 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms